HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:9.5 nTPM
HPA Brain:49.4 nTPM
GTEx:9.5 nTPM
FANTOM5:71.4 Scaled Tags Per Million
Pig:38.5 nTPM
Mouse:24.2 nTPM
Allen mouse:6.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046577Antibody HPA049664
Glial cells Not detectedNot detected
Neuronal cells MediumMedium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 49.4
Sample id Sample description nTPM
Hippocampus
nTPM: 46.8
2621 Female, age 67, right hemisphere 52.2
2529 Female, age 94, left hemisphere 49.7
1911 Female, age 85, right hemisphere 48.3
2148 Female, age 91, left hemisphere 45.0
1855 Male, age 76, left hemisphere 44.7
1898 Male, age 80, left hemisphere 41.1
Dentate gyrus
nTPM: 44.4
1927 Female, age 91, both hemispheres 46.6
2246 Female, age 85, both hemispheres 45.4
2010 Male, age 76, both hemispheres 45.2
2530 Female, age 94, left hemisphere 45.0
2528 Male, age 74, both hemispheres 43.3
2531 Female, age 67, both hemispheres 40.9
Entorhinal gyrus
nTPM: 43.5
1938 Female, age 85, left hemisphere 46.1
2117 Female, age 91, right hemisphere 45.1
2686 Male, age 75, right hemisphere 44.0
2764 Male, age 80, right hemisphere 43.6
1787 Male, age 76, left hemisphere 43.4
2613 Female, age 94, left hemisphere 38.9
Hippocampus, CA1
nTPM: 45.4
2527 Male, age 74, both hemispheres 47.5
1873 Female, age 85, both hemispheres 47.2
2082 Female, age 91, right hemisphere 46.4
2749 Male, age 80, left hemisphere 45.2
2045 Male, age 76, both hemispheres 40.8
Hippocampus, CA2
nTPM: 44.0
1940 Female, age 85, left hemisphere 48.3
1963 Male, age 80, left hemisphere 47.2
2249 Male, age 74, both hemispheres 44.9
1892 Male, age 76, both hemispheres 42.5
2437 Female, age 94, left hemisphere 41.3
2113 Female, age 91, right hemisphere 39.7
Hippocampus, CA3
nTPM: 46.2
2436 Male, age 74, both hemispheres 54.5
1891 Female, age 85, both hemispheres 50.6
2137 Male, age 80, left hemisphere 45.9
1867 Male, age 76, both hemispheres 45.6
2620 Female, age 94, left hemisphere 42.3
2861 Female, age 67, both hemispheres 38.3
Parahippocampal cortex
nTPM: 44.3
1850 Male, age 80, both hemispheres 49.1
2018 Male, age 76, both hemispheres 46.9
2245 Female, age 91, both hemispheres 46.7
2693 Female, age 94, both hemispheres 45.9
2692 Male, age 74, both hemispheres 45.5
1933 Female, age 85, both hemispheres 44.2
2250 Female, age 67, right hemisphere 42.2
2532 Female, age 72, left hemisphere 41.1
2622 Female, age 67, right hemisphere 40.6
1990 Female, age 91, right hemisphere 40.4
Perirhinal gyrus
nTPM: 45.5
1841 Female, age 85, right hemisphere 49.4
1847 Female, age 91, left hemisphere 49.1
1794 Male, age 80, right hemisphere 45.8
2848 Male, age 76, right hemisphere 41.9
2521 Female, age 94, right hemisphere 41.3
Subiculum
nTPM: 49.4
2438 Female, age 94, left hemisphere 63.9
2619 Male, age 74, both hemispheres 49.8
1901 Male, age 80, both hemispheres 47.1
1977 Female, age 85, both hemispheres 46.7
2042 Male, age 76, both hemispheres 44.9
2729 Female, age 91, right hemisphere 44.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.5
Samples: 197

Max nTPM: 21.9
Min nTPM: 2.2
Std nTPM: 3.3
Median nTPM: 9.3
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 21.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 20.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 18.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 17.6
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 17.2
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 16.6
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 16.4
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 15.1
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 15.0
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 14.7
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 14.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 71.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 71.4
FF:10169-103B7 60 years, female 77.8
FF:10153-102I9 76 years, female 65.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 38.5
Pig sample Sample description nTPM
Subiculum
nTPM: 36.3
Samples: 4

Max nTPM: 41.3
Min nTPM: 33.0
Sample A Female 41.3
Sample B Female 35.8
Sample C Male 34.9
Sample D Male 33.0
Dorsal hippocampus
nTPM: 38.5
Samples: 4

Max nTPM: 41.0
Min nTPM: 33.3
Sample A Female 41.0
Sample B Female 39.0
Sample C Male 40.7
Sample D Male 33.3
Entorhinal cortex
nTPM: 34.7
Samples: 4

Max nTPM: 38.2
Min nTPM: 30.7
Sample A Female 38.2
Sample B Female 35.8
Sample C Male 34.1
Sample D Male 30.7
Ventral hippocampus
nTPM: 36.8
Samples: 4

Max nTPM: 39.5
Min nTPM: 32.9
Sample A Female 35.8
Sample B Female 32.9
Sample C Male 39.5
Sample D Male 39.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.2
Samples: 4

Max nTPM: 26.5
Min nTPM: 21.5
Sample A Male 22.4
Sample B Male 22.5
Sample C Female 21.5
Sample D Female 26.5
Hippocampal formation
nTPM: 24.2
Samples: 4

Max nTPM: 28.0
Min nTPM: 20.1
Sample A Male 20.8
Sample B Male 27.9
Sample C Female 28.0
Sample D Female 20.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.8
68546440 Antisense, RP_050120_02_E04, Mouse strain C57BL/6J (56 days, male) 6.8

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