HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:41.3 nTPM
HPA Brain:46.9 nTPM
GTEx:41.3 nTPM
FANTOM5:40.1 Scaled Tags Per Million
Pig:24.7 nTPM
Mouse:78.3 nTPM
Allen mouse:5.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA010649
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 46.9
Sample id Sample description nTPM
Hippocampus
nTPM: 46.3
1898 Male, age 80, left hemisphere 53.8
2621 Female, age 67, right hemisphere 49.9
1855 Male, age 76, left hemisphere 48.3
1911 Female, age 85, right hemisphere 43.0
2148 Female, age 91, left hemisphere 41.6
2529 Female, age 94, left hemisphere 41.5
Dentate gyrus
nTPM: 43.0
2010 Male, age 76, both hemispheres 49.3
1927 Female, age 91, both hemispheres 48.1
2530 Female, age 94, left hemisphere 46.5
2246 Female, age 85, both hemispheres 42.2
2528 Male, age 74, both hemispheres 37.7
2531 Female, age 67, both hemispheres 34.0
Entorhinal gyrus
nTPM: 39.5
1938 Female, age 85, left hemisphere 44.7
2764 Male, age 80, right hemisphere 42.2
2117 Female, age 91, right hemisphere 39.9
1787 Male, age 76, left hemisphere 38.9
2686 Male, age 75, right hemisphere 36.3
2613 Female, age 94, left hemisphere 35.0
Hippocampus, CA1
nTPM: 44.5
2749 Male, age 80, left hemisphere 52.0
1873 Female, age 85, both hemispheres 46.0
2045 Male, age 76, both hemispheres 43.6
2527 Male, age 74, both hemispheres 42.4
2082 Female, age 91, right hemisphere 38.6
Hippocampus, CA2
nTPM: 43.1
1892 Male, age 76, both hemispheres 49.4
2437 Female, age 94, left hemisphere 46.0
1963 Male, age 80, left hemisphere 45.2
2249 Male, age 74, both hemispheres 41.1
1940 Female, age 85, left hemisphere 39.6
2113 Female, age 91, right hemisphere 37.1
Hippocampus, CA3
nTPM: 46.9
2620 Female, age 94, left hemisphere 52.1
2436 Male, age 74, both hemispheres 49.9
1867 Male, age 76, both hemispheres 47.3
2861 Female, age 67, both hemispheres 46.1
2137 Male, age 80, left hemisphere 45.9
1891 Female, age 85, both hemispheres 39.8
Parahippocampal cortex
nTPM: 37.9
1933 Female, age 85, both hemispheres 42.5
2692 Male, age 74, both hemispheres 41.3
2250 Female, age 67, right hemisphere 40.5
1850 Male, age 80, both hemispheres 39.2
2018 Male, age 76, both hemispheres 38.9
2532 Female, age 72, left hemisphere 37.9
1990 Female, age 91, right hemisphere 35.3
2622 Female, age 67, right hemisphere 35.1
2693 Female, age 94, both hemispheres 34.7
2245 Female, age 91, both hemispheres 33.5
Perirhinal gyrus
nTPM: 42.1
1794 Male, age 80, right hemisphere 49.0
1847 Female, age 91, left hemisphere 47.7
1841 Female, age 85, right hemisphere 40.3
2521 Female, age 94, right hemisphere 38.9
2848 Male, age 76, right hemisphere 34.5
Subiculum
nTPM: 40.1
2619 Male, age 74, both hemispheres 44.7
2042 Male, age 76, both hemispheres 42.5
1901 Male, age 80, both hemispheres 41.9
1977 Female, age 85, both hemispheres 39.2
2729 Female, age 91, right hemisphere 38.0
2438 Female, age 94, left hemisphere 34.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 41.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 41.3
Samples: 197

Max nTPM: 78.6
Min nTPM: 21.7
Std nTPM: 8.7
Median nTPM: 39.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 78.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 69.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 69.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 67.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 65.0
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 63.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 62.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 60.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 60.4
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 58.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 57.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.1
FF:10169-103B7 60 years, female 50.8
FF:10153-102I9 76 years, female 29.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.7
Pig sample Sample description nTPM
Subiculum
nTPM: 19.2
Samples: 4

Max nTPM: 24.1
Min nTPM: 15.2
Sample A Female 24.1
Sample B Female 18.1
Sample C Male 19.4
Sample D Male 15.2
Dorsal hippocampus
nTPM: 24.7
Samples: 4

Max nTPM: 33.1
Min nTPM: 16.8
Sample A Female 33.1
Sample B Female 23.1
Sample C Male 25.8
Sample D Male 16.8
Entorhinal cortex
nTPM: 18.2
Samples: 4

Max nTPM: 20.8
Min nTPM: 15.1
Sample A Female 20.8
Sample B Female 19.3
Sample C Male 17.6
Sample D Male 15.1
Ventral hippocampus
nTPM: 22.4
Samples: 4

Max nTPM: 29.0
Min nTPM: 16.0
Sample A Female 22.8
Sample B Female 16.0
Sample C Male 29.0
Sample D Male 21.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 78.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 71.8
Samples: 4

Max nTPM: 78.4
Min nTPM: 68.8
Sample A Male 69.0
Sample B Male 68.8
Sample C Female 78.4
Sample D Female 70.9
Hippocampal formation
nTPM: 78.3
Samples: 4

Max nTPM: 82.4
Min nTPM: 73.6
Sample A Male 80.3
Sample B Male 73.6
Sample C Female 76.9
Sample D Female 82.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.1
513235 Antisense, RP_040810_01_D02, Mouse strain C57BL/6J (56 days, male) 5.1

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