HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:14.9 nTPM
HPA Brain:54.0 nTPM
GTEx:14.9 nTPM
FANTOM5:39.1 Scaled Tags Per Million
Pig:33.0 nTPM
Mouse:49.1 nTPM
Allen mouse:7.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041756
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 54.0
Sample id Sample description nTPM
Hippocampus
nTPM: 48.0
2529 Female, age 94, left hemisphere 52.7
2148 Female, age 91, left hemisphere 52.2
2621 Female, age 67, right hemisphere 51.9
1911 Female, age 85, right hemisphere 47.6
1855 Male, age 76, left hemisphere 43.8
1898 Male, age 80, left hemisphere 40.0
Dentate gyrus
nTPM: 49.3
2531 Female, age 67, both hemispheres 61.5
1927 Female, age 91, both hemispheres 51.1
2528 Male, age 74, both hemispheres 49.2
2530 Female, age 94, left hemisphere 45.3
2010 Male, age 76, both hemispheres 45.1
2246 Female, age 85, both hemispheres 43.6
Entorhinal gyrus
nTPM: 54.0
2613 Female, age 94, left hemisphere 63.5
2764 Male, age 80, right hemisphere 59.1
2686 Male, age 75, right hemisphere 58.8
1787 Male, age 76, left hemisphere 51.6
2117 Female, age 91, right hemisphere 47.3
1938 Female, age 85, left hemisphere 43.7
Hippocampus, CA1
nTPM: 46.4
2082 Female, age 91, right hemisphere 50.9
2045 Male, age 76, both hemispheres 48.0
2527 Male, age 74, both hemispheres 45.6
1873 Female, age 85, both hemispheres 44.3
2749 Male, age 80, left hemisphere 43.3
Hippocampus, CA2
nTPM: 48.3
2437 Female, age 94, left hemisphere 53.0
2113 Female, age 91, right hemisphere 50.0
1963 Male, age 80, left hemisphere 49.0
1940 Female, age 85, left hemisphere 48.2
1892 Male, age 76, both hemispheres 45.9
2249 Male, age 74, both hemispheres 43.7
Hippocampus, CA3
nTPM: 52.6
2620 Female, age 94, left hemisphere 63.0
2861 Female, age 67, both hemispheres 59.8
2137 Male, age 80, left hemisphere 50.4
1867 Male, age 76, both hemispheres 48.9
1891 Female, age 85, both hemispheres 48.2
2436 Male, age 74, both hemispheres 45.4
Parahippocampal cortex
nTPM: 53.3
2622 Female, age 67, right hemisphere 64.0
2245 Female, age 91, both hemispheres 57.5
2692 Male, age 74, both hemispheres 53.8
2018 Male, age 76, both hemispheres 53.3
1850 Male, age 80, both hemispheres 52.6
2693 Female, age 94, both hemispheres 52.3
1990 Female, age 91, right hemisphere 51.4
2250 Female, age 67, right hemisphere 51.4
2532 Female, age 72, left hemisphere 50.0
1933 Female, age 85, both hemispheres 46.8
Perirhinal gyrus
nTPM: 50.1
2848 Male, age 76, right hemisphere 53.9
1794 Male, age 80, right hemisphere 53.2
2521 Female, age 94, right hemisphere 50.0
1847 Female, age 91, left hemisphere 46.9
1841 Female, age 85, right hemisphere 46.2
Subiculum
nTPM: 49.6
2729 Female, age 91, right hemisphere 54.6
2042 Male, age 76, both hemispheres 54.0
2619 Male, age 74, both hemispheres 50.3
1977 Female, age 85, both hemispheres 47.8
2438 Female, age 94, left hemisphere 46.2
1901 Male, age 80, both hemispheres 44.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.9
Samples: 197

Max nTPM: 27.9
Min nTPM: 6.4
Std nTPM: 3.9
Median nTPM: 14.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 27.9
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 27.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 24.3
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 23.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 23.4
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 23.3
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 22.8
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 22.2
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 22.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 22.0
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 22.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 39.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 39.1
FF:10153-102I9 76 years, female 50.2
FF:10169-103B7 60 years, female 28.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 33.0
Pig sample Sample description nTPM
Subiculum
nTPM: 29.9
Samples: 4

Max nTPM: 37.7
Min nTPM: 25.0
Sample A Female 37.7
Sample B Female 27.2
Sample C Male 29.8
Sample D Male 25.0
Dorsal hippocampus
nTPM: 33.0
Samples: 4

Max nTPM: 39.3
Min nTPM: 27.5
Sample A Female 39.3
Sample B Female 32.5
Sample C Male 32.7
Sample D Male 27.5
Entorhinal cortex
nTPM: 30.5
Samples: 4

Max nTPM: 31.6
Min nTPM: 28.1
Sample A Female 31.5
Sample B Female 30.7
Sample C Male 31.6
Sample D Male 28.1
Ventral hippocampus
nTPM: 32.6
Samples: 4

Max nTPM: 40.3
Min nTPM: 23.9
Sample A Female 30.6
Sample B Female 23.9
Sample C Male 40.3
Sample D Male 35.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 49.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 49.1
Samples: 4

Max nTPM: 51.0
Min nTPM: 45.2
Sample A Male 50.1
Sample B Male 45.2
Sample C Female 50.1
Sample D Female 51.0
Hippocampal formation
nTPM: 42.7
Samples: 4

Max nTPM: 48.9
Min nTPM: 38.2
Sample A Male 38.2
Sample B Male 41.4
Sample C Female 42.3
Sample D Female 48.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.0
68924467 Antisense, RP_050303_02_D07, Mouse strain C57BL/6J (56 days, male) 7.0

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