HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:100.9 nTPM
HPA Brain:238.6 nTPM
GTEx:100.9 nTPM
FANTOM5:250.7 Scaled Tags Per Million
Pig:179.3 nTPM
Mouse:318.2 nTPM
Allen mouse:22.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046149Antibody HPA050196Antibody CAB037225Antibody CAB037227
Glial cells Not detectedNot detectedNot detectedLow
Neuronal cells HighMediumMediumHigh









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 238.6
Sample id Sample description nTPM
Hippocampus
nTPM: 125.4
1898 Male, age 80, left hemisphere 218.0
1855 Male, age 76, left hemisphere 149.6
2621 Female, age 67, right hemisphere 132.4
2148 Female, age 91, left hemisphere 115.2
1911 Female, age 85, right hemisphere 80.2
2529 Female, age 94, left hemisphere 57.2
Dentate gyrus
nTPM: 145.7
1927 Female, age 91, both hemispheres 253.1
2010 Male, age 76, both hemispheres 151.7
2246 Female, age 85, both hemispheres 133.7
2530 Female, age 94, left hemisphere 121.2
2531 Female, age 67, both hemispheres 107.8
2528 Male, age 74, both hemispheres 106.9
Entorhinal gyrus
nTPM: 133.8
2764 Male, age 80, right hemisphere 171.0
2613 Female, age 94, left hemisphere 170.9
1938 Female, age 85, left hemisphere 164.6
1787 Male, age 76, left hemisphere 126.5
2686 Male, age 75, right hemisphere 97.6
2117 Female, age 91, right hemisphere 72.0
Hippocampus, CA1
nTPM: 170.0
2749 Male, age 80, left hemisphere 312.8
1873 Female, age 85, both hemispheres 170.7
2045 Male, age 76, both hemispheres 139.7
2082 Female, age 91, right hemisphere 123.1
2527 Male, age 74, both hemispheres 103.9
Hippocampus, CA2
nTPM: 149.6
1963 Male, age 80, left hemisphere 231.3
1892 Male, age 76, both hemispheres 216.0
1940 Female, age 85, left hemisphere 140.4
2113 Female, age 91, right hemisphere 118.1
2437 Female, age 94, left hemisphere 103.7
2249 Male, age 74, both hemispheres 88.2
Hippocampus, CA3
nTPM: 134.6
2137 Male, age 80, left hemisphere 221.8
1867 Male, age 76, both hemispheres 146.4
2620 Female, age 94, left hemisphere 127.6
2436 Male, age 74, both hemispheres 114.3
1891 Female, age 85, both hemispheres 105.6
2861 Female, age 67, both hemispheres 92.0
Parahippocampal cortex
nTPM: 154.1
1850 Male, age 80, both hemispheres 239.4
1990 Female, age 91, right hemisphere 200.7
2245 Female, age 91, both hemispheres 176.1
2693 Female, age 94, both hemispheres 175.5
1933 Female, age 85, both hemispheres 164.3
2250 Female, age 67, right hemisphere 156.4
2532 Female, age 72, left hemisphere 149.4
2018 Male, age 76, both hemispheres 111.7
2622 Female, age 67, right hemisphere 89.2
2692 Male, age 74, both hemispheres 77.9
Perirhinal gyrus
nTPM: 238.6
1847 Female, age 91, left hemisphere 334.2
2521 Female, age 94, right hemisphere 248.8
1794 Male, age 80, right hemisphere 237.6
1841 Female, age 85, right hemisphere 208.9
2848 Male, age 76, right hemisphere 163.4
Subiculum
nTPM: 100.9
1977 Female, age 85, both hemispheres 143.2
1901 Male, age 80, both hemispheres 141.2
2438 Female, age 94, left hemisphere 93.6
2729 Female, age 91, right hemisphere 78.8
2042 Male, age 76, both hemispheres 74.9
2619 Male, age 74, both hemispheres 73.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 100.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 100.9
Samples: 197

Max nTPM: 383.2
Min nTPM: 12.4
Std nTPM: 68.6
Median nTPM: 88.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 383.2
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 272.8
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 262.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 262.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 257.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 248.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 247.9
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 243.6
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 241.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 236.1
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 235.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 250.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 250.7
FF:10169-103B7 60 years, female 360.3
FF:10153-102I9 76 years, female 141.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 179.3
Pig sample Sample description nTPM
Subiculum
nTPM: 140.2
Samples: 4

Max nTPM: 174.6
Min nTPM: 120.0
Sample A Female 174.6
Sample B Female 124.8
Sample C Male 141.3
Sample D Male 120.0
Dorsal hippocampus
nTPM: 171.5
Samples: 4

Max nTPM: 223.7
Min nTPM: 104.0
Sample A Female 223.7
Sample B Female 217.0
Sample C Male 104.0
Sample D Male 141.4
Entorhinal cortex
nTPM: 137.6
Samples: 4

Max nTPM: 149.6
Min nTPM: 132.5
Sample A Female 149.6
Sample B Female 132.5
Sample C Male 134.6
Sample D Male 133.7
Ventral hippocampus
nTPM: 179.3
Samples: 4

Max nTPM: 221.7
Min nTPM: 127.3
Sample A Female 221.7
Sample B Female 127.3
Sample C Male 199.6
Sample D Male 168.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 318.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 318.2
Samples: 4

Max nTPM: 399.2
Min nTPM: 265.1
Sample A Male 265.1
Sample B Male 310.4
Sample C Female 298.2
Sample D Female 399.2
Hippocampal formation
nTPM: 288.5
Samples: 4

Max nTPM: 322.4
Min nTPM: 243.7
Sample A Male 322.4
Sample B Male 288.6
Sample C Female 299.2
Sample D Female 243.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 22.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 22.3
68924401 Antisense, RP_050303_02_C08, Mouse strain C57BL/6J (56 days, male) 23.6
75651234 Antisense, RP_060518_01_D12, Mouse strain C57BL/6J (56 days, male) 21.0

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