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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
215.7
nTPM
FANTOM5:
475.5
Scaled Tags Per Million
Pig:
116.3
nTPM
Allen mouse:
15.3
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
215.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 81.9
1984
Male, age 76, both hemispheres
93.7
2301
Female, age 85, both hemispheres
88.0
2188
Female, age 91, both hemispheres
76.7
2090
Male, age 80, both hemispheres
69.2
Dorsal cochlear nucleus nTPM: 79.7
2058
Male, age 76, both hemispheres
97.0
2187
Female, age 91, both hemispheres
92.3
2370
Male, age 61, both hemispheres
77.3
2802
Male, age 74, right hemisphere
75.1
2378
Male, age 80, both hemispheres
56.6
Dorsal tegmental nucleus nTPM: 84.5
2083
Male, age 80, both hemispheres
98.5
1936
Male, age 76, left hemisphere
91.9
2326
Male, age 74, both hemispheres
78.0
2358
Male, age 61, both hemispheres
69.6
Dorsolateral tegmental area nTPM: 84.1
2654
Male, age 80, both hemispheres
100.4
2141
Male, age 76, both hemispheres
99.8
2751
Female, age 85, both hemispheres
95.6
2360
Male, age 74, both hemispheres
89.9
2337
Male, age 61, both hemispheres
34.7
Kolliker-Fuse nucleus nTPM: 89.5
2163
Male, age 80, both hemispheres
111.9
2315
Male, age 76, right hemisphere
82.8
2793
Female, age 91, left hemisphere
73.7
Lateral lemniscal nuclei nTPM: 166.0
2169
Male, age 76, both hemispheres
234.2
2746
Female, age 85, left hemisphere
179.4
2036
Male, age 80, both hemispheres
178.0
2453
Male, age 74, right hemisphere
160.3
2320
Female, age 91, left hemisphere
78.2
Lateral parabrachial nucleus nTPM: 117.3
2139
Female, age 85, right hemisphere
197.8
2013
Male, age 80, both hemispheres
115.0
2790
Male, age 61, both hemispheres
104.6
2792
Male, age 76, both hemispheres
51.8
Lateral vestibular nucleus nTPM: 88.5
2184
Male, age 76, both hemispheres
98.6
2311
Male, age 80, both hemispheres
78.5
Locus coeruleus nTPM: 160.0
2123
Female, age 91, both hemispheres
228.3
2720
Male, age 74, both hemispheres
190.6
2014
Male, age 55, unknown
164.4
2788
Male, age 74, unknown
163.8
2317
Female, age 72, unknown
129.2
1980
Male, age 76, both hemispheres
126.0
2162
Male, age 80, both hemispheres
117.5
Medial parabrachial nucleus nTPM: 98.4
2854
Male, age 80, both hemispheres
133.5
2156
Male, age 61, both hemispheres
100.1
2170
Female, age 91, both hemispheres
98.6
2786
Male, age 76, both hemispheres
88.7
2463
Female, age 85, right hemisphere
70.9
Medial periolivary nuclei nTPM: 165.8
2171
Female, age 85, both hemispheres
270.8
2063
Male, age 76, both hemispheres
260.9
2791
Male, age 74, right hemisphere
139.4
2081
Male, age 80, both hemispheres
92.2
2458
Female, age 91, both hemispheres
65.9
Motor facial nucleus nTPM: 156.1
2062
Male, age 76, both hemispheres
274.9
2365
Male, age 74, right hemisphere
167.5
2697
Female, age 85, both hemispheres
151.4
2327
Male, age 80, both hemispheres
144.2
2126
Male, age 61, both hemispheres
111.3
2795
Female, age 91, both hemispheres
87.3
Motor trigeminal nucleus nTPM: 109.6
2079
Male, age 80, both hemispheres
164.7
2309
Male, age 76, both hemispheres
105.8
2335
Male, age 61, both hemispheres
105.6
2560
Male, age 74, both hemispheres
99.8
2321
Female, age 91, both hemispheres
72.1
Nuclei of the trapezoid body nTPM: 214.7
2159
Male, age 61, both hemispheres
333.7
2735
Female, age 85, both hemispheres
268.5
1983
Male, age 76, both hemispheres
257.3
2166
Male, age 80, both hemispheres
136.4
2368
Female, age 91, both hemispheres
77.7
Nucleus raphe magnus nTPM: 215.7
2160
Male, age 61, both hemispheres
399.0
2172
Female, age 85, both hemispheres
265.2
2455
Male, age 74, both hemispheres
237.8
2051
Male, age 76, both hemispheres
163.7
2328
Male, age 80, both hemispheres
142.5
2459
Female, age 91, both hemispheres
86.2
Paramedian reticular nucleus nTPM: 153.1
2050
Female, age 85, both hemispheres
212.8
2313
Male, age 61, both hemispheres
165.3
2057
Male, age 80, both hemispheres
133.1
2052
Male, age 76, both hemispheres
101.1
Pedunculopontine tegmental nucleus nTPM: 112.6
1921
Female, age 85, both hemispheres
121.6
2334
Male, age 80, both hemispheres
114.9
2338
Male, age 61, both hemispheres
101.2
Pontine nuclei nTPM: 202.3
2727
Male, age 61, right hemisphere
384.0
2787
Female, age 85, both hemispheres
252.1
1863
Male, age 55, unknown
236.3
2109
Female, age 72, unknown
219.8
1968
Male, age 76, left hemisphere
211.3
2454
Male, age 74, left hemisphere
130.9
2115
Male, age 80, left hemisphere
100.7
2319
Female, age 91, both hemispheres
82.9
Pontine raphe nucleus nTPM: 162.5
2122
Female, age 85, midline
222.5
2853
Male, age 76, midline
102.5
Posteroventral cochlear nucleus nTPM: 80.6
2752
Female, age 85, both hemispheres
165.0
2070
Male, age 76, both hemispheres
107.9
2371
Male, age 61, both hemispheres
66.4
2341
Male, age 80, both hemispheres
41.3
2135
Female, age 91, both hemispheres
22.5
Principal sensory trigeminal nucleus nTPM: 168.6
2158
Male, age 61, both hemispheres
299.6
2008
Male, age 80, left hemisphere
212.9
2324
Male, age 76, both hemispheres
89.8
2367
Female, age 91, left hemisphere
72.1
Reticular pontine nucleus, caudal nTPM: 118.2
2092
Male, age 76, both hemispheres
175.7
2332
Male, age 80, right hemisphere
144.5
2559
Male, age 74, both hemispheres
85.7
2457
Female, age 91, both hemispheres
66.9
Reticular pontine nucleus, oral nTPM: 117.1
2012
Female, age 85, both hemispheres
180.6
2361
Male, age 74, both hemispheres
154.7
1939
Male, age 80, both hemispheres
100.9
2167
Male, age 76, both hemispheres
88.6
2366
Female, age 91, both hemispheres
60.4
Reticulotegmental nucleus nTPM: 112.1
2325
Male, age 76, both hemispheres
174.1
2452
Male, age 74, both hemispheres
99.4
2333
Male, age 80, both hemispheres
93.5
2322
Female, age 91, both hemispheres
81.3
Spinal trigeminal nucleus, oral nTPM: 101.5
2737
Female, age 85, both hemispheres
122.5
1978
Male, age 76, both hemispheres
98.8
2164
Male, age 80, both hemispheres
83.1
Subcoeruleus area nTPM: 132.1
2323
Female, age 91, left hemisphere
169.1
1958
Male, age 80, both hemispheres
166.3
2089
Male, age 76, left hemisphere
162.6
2451
Male, age 74, both hemispheres
92.7
2369
Female, age 85, left hemisphere
69.8
Superior olive nTPM: 159.3
1875
Female, age 85, both hemispheres
256.6
2020
Male, age 76, both hemispheres
166.9
2364
Male, age 74, right hemisphere
164.7
2329
Male, age 80, right hemisphere
123.8
2561
Female, age 91, both hemispheres
84.4
Ventral periolivary nuclei nTPM: 178.7
2130
Female, age 85, both hemispheres
238.0
2165
Male, age 80, both hemispheres
195.7
2023
Male, age 76, both hemispheres
162.7
2794
Female, age 91, left hemisphere
118.4
Ventrolateral tegmental area, A5 NE cell group nTPM: 127.6
2449
Male, age 74, both hemispheres
185.8
1959
Male, age 76, both hemispheres
173.8
2840
Female, age 85, both hemispheres
145.9
2161
Male, age 80, both hemispheres
123.7
2359
Male, age 61, both hemispheres
88.5
2456
Female, age 91, both hemispheres
48.1
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
116.3
Pig sample
Sample description
nTPM
Pons nTPM: 116.4
Samples: 4
Max nTPM: 171.8
Min nTPM: 75.2
Sample A
Female
75.2
Sample B
Female
101.2
Sample C
Male
117.2
Sample D
Male
171.8
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
