HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:113.1 nTPM
HPA Brain:136.7 nTPM
GTEx:113.1 nTPM
FANTOM5:49.8 Scaled Tags Per Million
Pig:92.5 nTPM
Mouse:92.2 nTPM
Allen mouse:5.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA015967
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 136.7
Sample id Sample description nTPM
Hippocampus
nTPM: 104.1
1898 Male, age 80, left hemisphere 125.7
2621 Female, age 67, right hemisphere 116.6
2529 Female, age 94, left hemisphere 101.9
2148 Female, age 91, left hemisphere 101.4
1855 Male, age 76, left hemisphere 92.4
1911 Female, age 85, right hemisphere 86.6
Dentate gyrus
nTPM: 104.4
2531 Female, age 67, both hemispheres 114.1
2530 Female, age 94, left hemisphere 108.5
1927 Female, age 91, both hemispheres 107.4
2246 Female, age 85, both hemispheres 106.0
2010 Male, age 76, both hemispheres 97.7
2528 Male, age 74, both hemispheres 92.8
Entorhinal gyrus
nTPM: 133.5
2613 Female, age 94, left hemisphere 178.6
2686 Male, age 75, right hemisphere 137.4
2764 Male, age 80, right hemisphere 133.5
1938 Female, age 85, left hemisphere 132.8
1787 Male, age 76, left hemisphere 125.2
2117 Female, age 91, right hemisphere 93.5
Hippocampus, CA1
nTPM: 113.3
2749 Male, age 80, left hemisphere 150.7
2527 Male, age 74, both hemispheres 118.2
1873 Female, age 85, both hemispheres 108.8
2045 Male, age 76, both hemispheres 95.0
2082 Female, age 91, right hemisphere 93.9
Hippocampus, CA2
nTPM: 106.9
2437 Female, age 94, left hemisphere 126.7
1892 Male, age 76, both hemispheres 118.8
1963 Male, age 80, left hemisphere 113.3
1940 Female, age 85, left hemisphere 97.3
2249 Male, age 74, both hemispheres 93.0
2113 Female, age 91, right hemisphere 92.1
Hippocampus, CA3
nTPM: 108.4
2861 Female, age 67, both hemispheres 134.5
2137 Male, age 80, left hemisphere 123.3
2620 Female, age 94, left hemisphere 108.2
1867 Male, age 76, both hemispheres 100.3
2436 Male, age 74, both hemispheres 93.3
1891 Female, age 85, both hemispheres 90.6
Parahippocampal cortex
nTPM: 127.0
2245 Female, age 91, both hemispheres 146.4
2622 Female, age 67, right hemisphere 142.5
2693 Female, age 94, both hemispheres 134.9
2532 Female, age 72, left hemisphere 132.7
1850 Male, age 80, both hemispheres 132.4
2692 Male, age 74, both hemispheres 126.2
1933 Female, age 85, both hemispheres 124.9
1990 Female, age 91, right hemisphere 120.8
2250 Female, age 67, right hemisphere 120.8
2018 Male, age 76, both hemispheres 88.7
Perirhinal gyrus
nTPM: 136.7
1847 Female, age 91, left hemisphere 159.3
2521 Female, age 94, right hemisphere 140.6
1794 Male, age 80, right hemisphere 137.3
1841 Female, age 85, right hemisphere 128.3
2848 Male, age 76, right hemisphere 118.2
Subiculum
nTPM: 102.9
2619 Male, age 74, both hemispheres 121.5
1977 Female, age 85, both hemispheres 117.3
2438 Female, age 94, left hemisphere 116.8
1901 Male, age 80, both hemispheres 105.0
2729 Female, age 91, right hemisphere 82.9
2042 Male, age 76, both hemispheres 74.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 113.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 113.1
Samples: 197

Max nTPM: 244.3
Min nTPM: 31.0
Std nTPM: 44.6
Median nTPM: 111.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 244.3
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 225.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 200.3
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 199.3
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 196.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 193.8
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 191.2
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 188.8
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 187.2
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 186.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 186.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 49.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 49.8
FF:10153-102I9 76 years, female 49.9
FF:10169-103B7 60 years, female 49.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 92.5
Pig sample Sample description nTPM
Subiculum
nTPM: 92.5
Samples: 4

Max nTPM: 129.0
Min nTPM: 61.4
Sample A Female 129.0
Sample B Female 80.0
Sample C Male 99.6
Sample D Male 61.4
Dorsal hippocampus
nTPM: 84.8
Samples: 4

Max nTPM: 109.0
Min nTPM: 58.9
Sample A Female 109.0
Sample B Female 87.3
Sample C Male 84.1
Sample D Male 58.9
Entorhinal cortex
nTPM: 59.1
Samples: 4

Max nTPM: 68.3
Min nTPM: 49.0
Sample A Female 68.3
Sample B Female 53.0
Sample C Male 66.0
Sample D Male 49.0
Ventral hippocampus
nTPM: 87.8
Samples: 4

Max nTPM: 120.5
Min nTPM: 55.6
Sample A Female 87.4
Sample B Female 55.6
Sample C Male 120.5
Sample D Male 87.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 92.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 92.2
Samples: 4

Max nTPM: 118.6
Min nTPM: 73.6
Sample A Male 73.6
Sample B Male 76.4
Sample C Female 100.2
Sample D Female 118.6
Hippocampal formation
nTPM: 81.2
Samples: 4

Max nTPM: 86.2
Min nTPM: 74.7
Sample A Male 86.2
Sample B Male 78.2
Sample C Female 74.7
Sample D Female 85.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.6
74579404 Antisense, RP_060215_01_C07, Mouse strain C57BL/6J (56 days, male) 10.0
79912548 Antisense, RP_080109_01_B02, Mouse strain C57BL/6J (56 days, male) 1.2

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