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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
16.8
nTPM
HPA Brain:
76.0
nTPM
GTEx:
16.8
nTPM
FANTOM5:
125.2
Scaled Tags Per Million
Pig:
16.6
nTPM
Mouse:
16.7
nTPM
Allen mouse:
0.1
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
76.0
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 59.5
1830
Male, age 51, unknown
68.8
1833
Male, age 53, unknown
68.8
1870
Female, age 42, unknown
66.7
2019
Male, age 18, unknown
62.5
2411
Female, age 72, unknown
61.6
2828
Female, age 72, unknown
60.0
2586
Male, age 75, left hemisphere
59.9
2666
Male, age 74, left hemisphere
59.7
1827
Male, age 72, unknown
46.1
2219
Male, age 76, both hemispheres
40.9
Dorsal raphe nucleus nTPM: 51.2
2750
Male, age 76, both hemispheres
62.6
2016
Female, age 72, unknown
53.6
1828
Male, age 53, unknown
51.6
2047
Male, age 72, unknown
45.0
2298
Female, age 72, unknown
43.4
Inferior colliculus nTPM: 51.0
2849
Male, age 72, unknown
56.1
1890
Male, age 53, unknown
54.4
2097
Female, age 72, unknown
47.6
1848
Female, age 42, unknown
45.7
Median raphe nucleus nTPM: 49.6
2220
Male, age 76, midline
49.6
Periaquaductal grey, anterior nTPM: 40.8
2502
Female, age 75, unknown
46.8
1795
Male, age 51, unknown
39.5
1947
Male, age 18, unknown
36.0
Periaquaductal grey, dorsal nTPM: 45.0
2850
Male, age 76, both hemispheres
51.7
1831
Male, age 72, unknown
48.0
2464
Female, age 72, unknown
45.2
1840
Male, age 53, unknown
34.9
Periaquaductal grey, lateral nTPM: 48.9
2140
Male, age 76, both hemispheres
50.6
2053
Male, age 18, unknown
48.2
2272
Male, age 74, both hemispheres
47.9
Pretectal area nTPM: 45.2
2407
Male, age 75, both hemispheres
58.7
2316
Male, age 76, right hemisphere
54.4
1815
Male, age 53, unknown
51.3
2667
Female, age 75, unknown
48.5
2825
Male, age 18, unknown
48.5
1817
Female, age 42, unknown
47.0
2273
Male, age 74, both hemispheres
42.2
2007
Male, age 72, unknown
42.1
2224
Female, age 72, unknown
38.0
1944
Female, age 72, unknown
34.8
1816
Male, age 51, unknown
31.7
Red nucleus nTPM: 76.0
1865
Male, age 51, unknown
89.6
1904
Male, age 53, unknown
85.1
2823
Male, age 76, right hemisphere
81.1
2503
Female, age 72, unknown
80.3
2227
Male, age 72, unknown
80.0
1954
Female, age 42, unknown
75.4
1821
Female, age 72, unknown
74.8
2769
Male, age 72, unknown
74.0
2785
Male, age 18, unknown
72.2
2725
Female, age 75, unknown
70.9
2584
Male, age 75, left hemisphere
65.4
2588
Male, age 74, left hemisphere
62.8
Substantia nigra nTPM: 50.4
2699
Male, age 18, unknown
66.8
2583
Male, age 75, right hemisphere
59.1
1851
Male, age 51, unknown
51.8
2665
Male, age 74, both hemispheres
50.6
2409
Female, age 72, unknown
49.1
2590
Female, age 75, unknown
48.7
1916
Female, age 42, unknown
46.9
1889
Female, age 72, unknown
44.4
1941
Male, age 53, unknown
44.0
2241
Male, age 72, unknown
42.7
Superior colliculus nTPM: 51.8
1913
Female, age 42, unknown
74.9
1995
Male, age 72, unknown
72.8
1895
Male, age 76, right hemisphere
52.9
2587
Male, age 74, left hemisphere
51.2
1839
Male, age 51, unknown
50.5
2664
Male, age 75, both hemispheres
47.8
1796
Male, age 53, unknown
47.0
2668
Female, age 75, unknown
44.0
2261
Male, age 18, unknown
39.0
2087
Female, age 72, unknown
38.1
Ventral tegmental area nTPM: 54.1
2223
Female, age 72, unknown
68.7
1942
Male, age 51, unknown
53.6
1915
Female, age 42, unknown
53.1
2218
Male, age 76, both hemispheres
51.2
2021
Male, age 53, unknown
50.6
2410
Female, age 72, unknown
47.5
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
16.8
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 16.8
Samples: 139
Max nTPM: 53.0
Min nTPM: 4.2
Std nTPM: 6.8
Median nTPM: 15.7
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
53.0
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
40.7
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
34.8
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
33.6
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
32.5
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
31.0
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
30.4
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
29.8
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
29.0
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
27.7
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
27.6
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
27.0
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
25.1
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
24.6
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
24.1
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
24.0
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
23.4
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
23.4
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
22.8
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
22.7
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
22.3
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
22.0
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
21.7
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
21.6
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
21.4
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
21.1
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
21.1
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
21.0
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
21.0
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
21.0
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
20.4
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
20.3
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
20.3
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
20.2
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
19.9
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
19.3
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
19.1
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
19.1
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
18.9
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
18.7
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
18.6
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
18.6
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
18.4
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
18.3
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
18.1
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
18.0
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
17.5
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
17.5
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
17.3
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
17.2
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
17.1
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
17.0
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
16.9
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
16.9
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
16.9
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
16.7
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
16.7
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
16.7
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
16.6
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
16.5
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
16.2
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
16.2
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
15.8
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
15.8
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
15.8
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
15.8
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
15.7
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
15.7
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
15.7
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
15.7
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
15.5
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
15.4
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
15.4
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
15.3
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
15.2
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
15.2
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
15.1
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
15.0
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
14.9
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
14.8
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
14.8
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
14.8
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
14.7
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
14.7
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
14.7
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
14.6
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
14.5
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
14.5
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
14.5
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
14.4
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
14.1
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
14.1
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
14.0
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
13.8
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
13.4
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
13.3
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
13.2
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
13.2
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
13.1
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
13.0
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
13.0
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
12.8
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
12.6
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
12.5
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
12.5
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
12.3
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
12.1
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
12.0
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
12.0
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
11.7
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
11.5
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
11.3
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
11.1
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
11.1
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
11.1
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
10.9
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
10.9
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
10.9
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
10.7
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
10.5
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
10.4
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
10.1
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
9.8
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
9.8
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
9.7
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
9.5
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
9.4
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
9.3
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
9.0
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
8.8
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
8.7
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
8.6
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
8.4
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
8.1
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
7.7
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
7.6
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
6.6
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
5.8
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
4.2
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
16.7
Mouse sample
Sample description
nTPM
Midbrain nTPM: 16.7
Samples: 4
Max nTPM: 18.1
Min nTPM: 15.1
Sample A
Male
15.1
Sample B
Male
16.6
Sample C
Female
18.1
Sample D
Female
16.8
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.