HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:25.6 nTPM
HPA Brain:20.1 nTPM
GTEx:25.6 nTPM
FANTOM5:99.5 Scaled Tags Per Million
Pig:34.1 nTPM
Mouse:24.9 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA076104
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.1
Sample id Sample description nTPM
Hippocampus
nTPM: 20.1
2621 Female, age 67, right hemisphere 23.6
1898 Male, age 80, left hemisphere 21.7
1911 Female, age 85, right hemisphere 20.9
1855 Male, age 76, left hemisphere 20.4
2529 Female, age 94, left hemisphere 19.1
2148 Female, age 91, left hemisphere 15.1
Dentate gyrus
nTPM: 17.9
2010 Male, age 76, both hemispheres 22.0
1927 Female, age 91, both hemispheres 20.0
2246 Female, age 85, both hemispheres 19.3
2531 Female, age 67, both hemispheres 16.8
2530 Female, age 94, left hemisphere 16.2
2528 Male, age 74, both hemispheres 13.3
Entorhinal gyrus
nTPM: 15.4
1938 Female, age 85, left hemisphere 20.0
1787 Male, age 76, left hemisphere 17.6
2117 Female, age 91, right hemisphere 17.0
2764 Male, age 80, right hemisphere 14.1
2686 Male, age 75, right hemisphere 12.6
2613 Female, age 94, left hemisphere 11.4
Hippocampus, CA1
nTPM: 20.1
2749 Male, age 80, left hemisphere 25.0
1873 Female, age 85, both hemispheres 21.6
2045 Male, age 76, both hemispheres 20.7
2527 Male, age 74, both hemispheres 19.6
2082 Female, age 91, right hemisphere 13.7
Hippocampus, CA2
nTPM: 18.8
1892 Male, age 76, both hemispheres 23.8
2249 Male, age 74, both hemispheres 21.6
1963 Male, age 80, left hemisphere 19.3
1940 Female, age 85, left hemisphere 17.3
2113 Female, age 91, right hemisphere 15.6
2437 Female, age 94, left hemisphere 15.2
Hippocampus, CA3
nTPM: 19.5
2137 Male, age 80, left hemisphere 23.0
1867 Male, age 76, both hemispheres 22.4
2436 Male, age 74, both hemispheres 21.2
1891 Female, age 85, both hemispheres 18.6
2861 Female, age 67, both hemispheres 16.2
2620 Female, age 94, left hemisphere 15.7
Parahippocampal cortex
nTPM: 17.8
2018 Male, age 76, both hemispheres 21.5
2250 Female, age 67, right hemisphere 20.5
1933 Female, age 85, both hemispheres 19.7
2245 Female, age 91, both hemispheres 19.1
1850 Male, age 80, both hemispheres 18.4
2532 Female, age 72, left hemisphere 17.7
1990 Female, age 91, right hemisphere 16.0
2692 Male, age 74, both hemispheres 15.2
2693 Female, age 94, both hemispheres 14.9
2622 Female, age 67, right hemisphere 14.6
Perirhinal gyrus
nTPM: 17.7
1841 Female, age 85, right hemisphere 19.3
2521 Female, age 94, right hemisphere 18.2
2848 Male, age 76, right hemisphere 17.8
1794 Male, age 80, right hemisphere 16.6
1847 Female, age 91, left hemisphere 16.5
Subiculum
nTPM: 17.8
2042 Male, age 76, both hemispheres 22.3
1901 Male, age 80, both hemispheres 20.0
1977 Female, age 85, both hemispheres 17.6
2619 Male, age 74, both hemispheres 16.1
2438 Female, age 94, left hemisphere 15.7
2729 Female, age 91, right hemisphere 15.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 25.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.6
Samples: 197

Max nTPM: 45.7
Min nTPM: 15.9
Std nTPM: 5.2
Median nTPM: 25.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 45.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 42.2
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 41.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 39.7
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 39.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 38.7
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 37.4
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 36.0
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 35.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 35.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 35.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 99.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 99.5
FF:10169-103B7 60 years, female 125.6
FF:10153-102I9 76 years, female 73.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 34.1
Pig sample Sample description nTPM
Subiculum
nTPM: 29.4
Samples: 4

Max nTPM: 35.5
Min nTPM: 22.4
Sample A Female 35.5
Sample B Female 28.6
Sample C Male 22.4
Sample D Male 31.2
Dorsal hippocampus
nTPM: 34.1
Samples: 4

Max nTPM: 44.7
Min nTPM: 26.6
Sample A Female 44.7
Sample B Female 35.7
Sample C Male 29.3
Sample D Male 26.6
Entorhinal cortex
nTPM: 26.7
Samples: 4

Max nTPM: 31.1
Min nTPM: 19.7
Sample A Female 28.4
Sample B Female 31.1
Sample C Male 27.6
Sample D Male 19.7
Ventral hippocampus
nTPM: 28.3
Samples: 4

Max nTPM: 34.0
Min nTPM: 22.7
Sample A Female 32.4
Sample B Female 22.7
Sample C Male 24.2
Sample D Male 34.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.9
Samples: 4

Max nTPM: 27.0
Min nTPM: 21.5
Sample A Male 21.5
Sample B Male 25.0
Sample C Female 27.0
Sample D Female 26.1
Hippocampal formation
nTPM: 24.0
Samples: 4

Max nTPM: 26.4
Min nTPM: 21.9
Sample A Male 26.4
Sample B Male 23.0
Sample C Female 24.5
Sample D Female 21.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
68633404 Antisense, RP_050125_02_G08, Mouse strain C57BL/6J (56 days, male) 1.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org