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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
236.0
nTPM
FANTOM5:
763.8
Scaled Tags Per Million
Pig:
592.8
nTPM
PONS - HPA Brain RNA-seq
Max nTPM
236.0
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 177.5
2301
Female, age 85, both hemispheres
217.4
2188
Female, age 91, both hemispheres
191.3
2090
Male, age 80, both hemispheres
152.8
1984
Male, age 76, both hemispheres
148.6
Dorsal cochlear nucleus nTPM: 156.7
2187
Female, age 91, both hemispheres
186.2
2370
Male, age 61, both hemispheres
166.2
2802
Male, age 74, right hemisphere
152.1
2058
Male, age 76, both hemispheres
141.6
2378
Male, age 80, both hemispheres
137.5
Dorsal tegmental nucleus nTPM: 186.0
2358
Male, age 61, both hemispheres
231.7
2083
Male, age 80, both hemispheres
197.2
2326
Male, age 74, both hemispheres
164.6
1936
Male, age 76, left hemisphere
150.3
Dorsolateral tegmental area nTPM: 170.6
2337
Male, age 61, both hemispheres
190.7
2654
Male, age 80, both hemispheres
187.7
2141
Male, age 76, both hemispheres
179.1
2751
Female, age 85, both hemispheres
159.6
2360
Male, age 74, both hemispheres
135.8
Kolliker-Fuse nucleus nTPM: 207.5
2793
Female, age 91, left hemisphere
242.8
2163
Male, age 80, both hemispheres
214.8
2315
Male, age 76, right hemisphere
164.8
Lateral lemniscal nuclei nTPM: 203.4
2169
Male, age 76, both hemispheres
259.1
2036
Male, age 80, both hemispheres
215.8
2746
Female, age 85, left hemisphere
196.3
2453
Male, age 74, right hemisphere
182.4
2320
Female, age 91, left hemisphere
163.5
Lateral parabrachial nucleus nTPM: 196.8
2139
Female, age 85, right hemisphere
253.5
2013
Male, age 80, both hemispheres
182.6
2790
Male, age 61, both hemispheres
178.9
2792
Male, age 76, both hemispheres
172.0
Lateral vestibular nucleus nTPM: 196.8
2184
Male, age 76, both hemispheres
210.0
2311
Male, age 80, both hemispheres
183.6
Locus coeruleus nTPM: 220.3
2720
Male, age 74, both hemispheres
278.9
2123
Female, age 91, both hemispheres
247.4
2014
Male, age 55, unknown
226.4
2162
Male, age 80, both hemispheres
209.3
1980
Male, age 76, both hemispheres
208.9
2788
Male, age 74, unknown
192.8
2317
Female, age 72, unknown
178.4
Medial parabrachial nucleus nTPM: 193.1
2854
Male, age 80, both hemispheres
246.4
2170
Female, age 91, both hemispheres
212.6
2156
Male, age 61, both hemispheres
204.4
2786
Male, age 76, both hemispheres
178.0
2463
Female, age 85, right hemisphere
124.0
Medial periolivary nuclei nTPM: 195.1
2171
Female, age 85, both hemispheres
264.7
2063
Male, age 76, both hemispheres
211.4
2791
Male, age 74, right hemisphere
191.1
2458
Female, age 91, both hemispheres
162.5
2081
Male, age 80, both hemispheres
145.8
Motor facial nucleus nTPM: 218.2
2697
Female, age 85, both hemispheres
277.7
2365
Male, age 74, right hemisphere
245.2
2062
Male, age 76, both hemispheres
227.3
2327
Male, age 80, both hemispheres
208.8
2795
Female, age 91, both hemispheres
175.8
2126
Male, age 61, both hemispheres
174.3
Motor trigeminal nucleus nTPM: 184.1
2335
Male, age 61, both hemispheres
214.8
2079
Male, age 80, both hemispheres
197.8
2560
Male, age 74, both hemispheres
189.7
2309
Male, age 76, both hemispheres
164.4
2321
Female, age 91, both hemispheres
154.1
Nuclei of the trapezoid body nTPM: 215.0
2159
Male, age 61, both hemispheres
263.2
1983
Male, age 76, both hemispheres
258.4
2735
Female, age 85, both hemispheres
234.0
2166
Male, age 80, both hemispheres
177.4
2368
Female, age 91, both hemispheres
142.0
Nucleus raphe magnus nTPM: 236.0
2172
Female, age 85, both hemispheres
307.5
2160
Male, age 61, both hemispheres
288.9
2455
Male, age 74, both hemispheres
239.4
2051
Male, age 76, both hemispheres
217.3
2328
Male, age 80, both hemispheres
203.5
2459
Female, age 91, both hemispheres
159.7
Paramedian reticular nucleus nTPM: 190.3
2050
Female, age 85, both hemispheres
232.9
2313
Male, age 61, both hemispheres
199.7
2057
Male, age 80, both hemispheres
173.9
2052
Male, age 76, both hemispheres
154.6
Pedunculopontine tegmental nucleus nTPM: 203.6
2338
Male, age 61, both hemispheres
227.8
2334
Male, age 80, both hemispheres
201.3
1921
Female, age 85, both hemispheres
181.7
Pontine nuclei nTPM: 220.3
2787
Female, age 85, both hemispheres
317.5
1863
Male, age 55, unknown
273.9
1968
Male, age 76, left hemisphere
227.7
2727
Male, age 61, right hemisphere
217.8
2109
Female, age 72, unknown
201.2
2454
Male, age 74, left hemisphere
188.5
2319
Female, age 91, both hemispheres
170.8
2115
Male, age 80, left hemisphere
165.0
Pontine raphe nucleus nTPM: 210.1
2122
Female, age 85, midline
232.4
2853
Male, age 76, midline
187.9
Posteroventral cochlear nucleus nTPM: 162.1
2752
Female, age 85, both hemispheres
180.2
2070
Male, age 76, both hemispheres
171.3
2135
Female, age 91, both hemispheres
163.9
2371
Male, age 61, both hemispheres
156.5
2341
Male, age 80, both hemispheres
138.3
Principal sensory trigeminal nucleus nTPM: 206.0
2158
Male, age 61, both hemispheres
251.0
2367
Female, age 91, left hemisphere
199.8
2324
Male, age 76, both hemispheres
196.4
2008
Male, age 80, left hemisphere
176.7
Reticular pontine nucleus, caudal nTPM: 185.8
2092
Male, age 76, both hemispheres
215.8
2332
Male, age 80, right hemisphere
201.6
2559
Male, age 74, both hemispheres
178.6
2457
Female, age 91, both hemispheres
147.1
Reticular pontine nucleus, oral nTPM: 196.2
2361
Male, age 74, both hemispheres
212.5
2366
Female, age 91, both hemispheres
205.4
2167
Male, age 76, both hemispheres
195.3
2012
Female, age 85, both hemispheres
193.2
1939
Male, age 80, both hemispheres
174.5
Reticulotegmental nucleus nTPM: 180.5
2325
Male, age 76, both hemispheres
206.7
2322
Female, age 91, both hemispheres
181.4
2333
Male, age 80, both hemispheres
175.6
2452
Male, age 74, both hemispheres
158.3
Spinal trigeminal nucleus, oral nTPM: 183.2
2164
Male, age 80, both hemispheres
201.8
2737
Female, age 85, both hemispheres
175.8
1978
Male, age 76, both hemispheres
172.0
Subcoeruleus area nTPM: 184.8
1958
Male, age 80, both hemispheres
219.7
2323
Female, age 91, left hemisphere
207.5
2089
Male, age 76, left hemisphere
191.5
2369
Female, age 85, left hemisphere
153.7
2451
Male, age 74, both hemispheres
151.6
Superior olive nTPM: 206.6
1875
Female, age 85, both hemispheres
258.1
2329
Male, age 80, right hemisphere
196.1
2364
Male, age 74, right hemisphere
193.6
2561
Female, age 91, both hemispheres
193.1
2020
Male, age 76, both hemispheres
191.8
Ventral periolivary nuclei nTPM: 214.6
2130
Female, age 85, both hemispheres
272.2
2165
Male, age 80, both hemispheres
225.2
2023
Male, age 76, both hemispheres
184.2
2794
Female, age 91, left hemisphere
176.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 199.3
2840
Female, age 85, both hemispheres
253.8
1959
Male, age 76, both hemispheres
217.7
2359
Male, age 61, both hemispheres
199.6
2449
Male, age 74, both hemispheres
199.0
2161
Male, age 80, both hemispheres
185.6
2456
Female, age 91, both hemispheres
139.8
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
