HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:47.7 nTPM
HPA Brain:45.5 nTPM
GTEx:47.7 nTPM
FANTOM5:35.3 Scaled Tags Per Million
Pig:71.9 nTPM
Mouse:37.2 nTPM
Allen mouse:2.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043671
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 45.5
Sample id Sample description nTPM
Hippocampus
nTPM: 44.4
1898 Male, age 80, left hemisphere 47.2
2529 Female, age 94, left hemisphere 46.5
1855 Male, age 76, left hemisphere 45.3
1911 Female, age 85, right hemisphere 43.6
2621 Female, age 67, right hemisphere 42.9
2148 Female, age 91, left hemisphere 41.1
Dentate gyrus
nTPM: 42.9
2530 Female, age 94, left hemisphere 47.1
2010 Male, age 76, both hemispheres 46.3
2246 Female, age 85, both hemispheres 41.8
2528 Male, age 74, both hemispheres 41.7
1927 Female, age 91, both hemispheres 41.1
2531 Female, age 67, both hemispheres 39.3
Entorhinal gyrus
nTPM: 45.5
2764 Male, age 80, right hemisphere 50.5
2117 Female, age 91, right hemisphere 50.4
1938 Female, age 85, left hemisphere 46.9
2613 Female, age 94, left hemisphere 44.7
1787 Male, age 76, left hemisphere 43.6
2686 Male, age 75, right hemisphere 37.2
Hippocampus, CA1
nTPM: 44.7
2749 Male, age 80, left hemisphere 52.9
1873 Female, age 85, both hemispheres 44.9
2045 Male, age 76, both hemispheres 43.9
2527 Male, age 74, both hemispheres 41.1
2082 Female, age 91, right hemisphere 40.7
Hippocampus, CA2
nTPM: 42.5
1963 Male, age 80, left hemisphere 47.2
2249 Male, age 74, both hemispheres 46.3
1940 Female, age 85, left hemisphere 42.8
1892 Male, age 76, both hemispheres 41.2
2113 Female, age 91, right hemisphere 38.9
2437 Female, age 94, left hemisphere 38.5
Hippocampus, CA3
nTPM: 42.7
2620 Female, age 94, left hemisphere 51.8
1867 Male, age 76, both hemispheres 46.7
2137 Male, age 80, left hemisphere 40.9
2436 Male, age 74, both hemispheres 39.8
1891 Female, age 85, both hemispheres 39.5
2861 Female, age 67, both hemispheres 37.3
Parahippocampal cortex
nTPM: 37.7
2245 Female, age 91, both hemispheres 43.7
1990 Female, age 91, right hemisphere 42.1
1933 Female, age 85, both hemispheres 41.3
2250 Female, age 67, right hemisphere 39.4
2018 Male, age 76, both hemispheres 36.9
2692 Male, age 74, both hemispheres 36.9
2532 Female, age 72, left hemisphere 36.6
1850 Male, age 80, both hemispheres 36.3
2693 Female, age 94, both hemispheres 32.3
2622 Female, age 67, right hemisphere 31.9
Perirhinal gyrus
nTPM: 39.7
1847 Female, age 91, left hemisphere 43.0
1794 Male, age 80, right hemisphere 41.6
2521 Female, age 94, right hemisphere 39.8
1841 Female, age 85, right hemisphere 38.6
2848 Male, age 76, right hemisphere 35.7
Subiculum
nTPM: 42.6
2042 Male, age 76, both hemispheres 47.2
1901 Male, age 80, both hemispheres 46.6
1977 Female, age 85, both hemispheres 46.6
2619 Male, age 74, both hemispheres 45.5
2729 Female, age 91, right hemisphere 37.8
2438 Female, age 94, left hemisphere 32.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 47.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 47.7
Samples: 197

Max nTPM: 84.6
Min nTPM: 17.5
Std nTPM: 9.6
Median nTPM: 47.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 84.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 77.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 76.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 74.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 70.7
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 68.3
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 66.6
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 65.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 65.5
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 64.7
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 63.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.3
FF:10169-103B7 60 years, female 38.4
FF:10153-102I9 76 years, female 32.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 71.9
Pig sample Sample description nTPM
Subiculum
nTPM: 53.6
Samples: 4

Max nTPM: 66.4
Min nTPM: 45.4
Sample A Female 66.4
Sample B Female 50.9
Sample C Male 51.8
Sample D Male 45.4
Dorsal hippocampus
nTPM: 71.9
Samples: 4

Max nTPM: 95.5
Min nTPM: 52.2
Sample A Female 95.5
Sample B Female 67.6
Sample C Male 72.4
Sample D Male 52.2
Entorhinal cortex
nTPM: 51.0
Samples: 4

Max nTPM: 55.8
Min nTPM: 45.7
Sample A Female 55.8
Sample B Female 52.7
Sample C Male 49.7
Sample D Male 45.7
Ventral hippocampus
nTPM: 64.4
Samples: 4

Max nTPM: 73.9
Min nTPM: 44.0
Sample A Female 67.4
Sample B Female 44.0
Sample C Male 73.9
Sample D Male 72.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 37.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 33.6
Samples: 4

Max nTPM: 36.2
Min nTPM: 30.3
Sample A Male 35.0
Sample B Male 36.2
Sample C Female 32.7
Sample D Female 30.3
Hippocampal formation
nTPM: 37.2
Samples: 4

Max nTPM: 40.4
Min nTPM: 34.6
Sample A Male 34.6
Sample B Male 36.0
Sample C Female 37.8
Sample D Female 40.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.2
392929 Antisense, RP_040804_01_H11, Mouse strain C57BL/6J (56 days, male) 2.2

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