HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:81.8 nTPM
HPA Brain:100.1 nTPM
GTEx:81.8 nTPM
FANTOM5:151.5 Scaled Tags Per Million
Pig:60.4 nTPM
Mouse:31.6 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003178Antibody HPA017876Antibody CAB015331
Glial cells HighHighHigh
Neuronal cells HighHighHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 100.1
Sample id Sample description nTPM
Hippocampus
nTPM: 99.4
1911 Female, age 85, right hemisphere 113.8
2529 Female, age 94, left hemisphere 111.5
1855 Male, age 76, left hemisphere 95.7
1898 Male, age 80, left hemisphere 95.5
2621 Female, age 67, right hemisphere 90.9
2148 Female, age 91, left hemisphere 89.2
Dentate gyrus
nTPM: 90.2
2530 Female, age 94, left hemisphere 104.7
2010 Male, age 76, both hemispheres 96.2
2246 Female, age 85, both hemispheres 88.6
2531 Female, age 67, both hemispheres 86.0
1927 Female, age 91, both hemispheres 82.9
2528 Male, age 74, both hemispheres 82.9
Entorhinal gyrus
nTPM: 94.1
2686 Male, age 75, right hemisphere 111.5
2117 Female, age 91, right hemisphere 107.8
1938 Female, age 85, left hemisphere 102.1
1787 Male, age 76, left hemisphere 87.1
2613 Female, age 94, left hemisphere 81.4
2764 Male, age 80, right hemisphere 74.6
Hippocampus, CA1
nTPM: 88.8
2527 Male, age 74, both hemispheres 98.0
1873 Female, age 85, both hemispheres 93.9
2082 Female, age 91, right hemisphere 88.7
2749 Male, age 80, left hemisphere 84.5
2045 Male, age 76, both hemispheres 79.1
Hippocampus, CA2
nTPM: 93.7
2249 Male, age 74, both hemispheres 103.7
2113 Female, age 91, right hemisphere 99.0
1940 Female, age 85, left hemisphere 92.8
1892 Male, age 76, both hemispheres 89.1
2437 Female, age 94, left hemisphere 89.1
1963 Male, age 80, left hemisphere 88.2
Hippocampus, CA3
nTPM: 95.2
2436 Male, age 74, both hemispheres 125.0
1891 Female, age 85, both hemispheres 101.7
1867 Male, age 76, both hemispheres 91.2
2861 Female, age 67, both hemispheres 86.4
2137 Male, age 80, left hemisphere 85.5
2620 Female, age 94, left hemisphere 81.4
Parahippocampal cortex
nTPM: 92.0
2018 Male, age 76, both hemispheres 102.3
1933 Female, age 85, both hemispheres 96.8
2245 Female, age 91, both hemispheres 96.0
2692 Male, age 74, both hemispheres 95.2
2250 Female, age 67, right hemisphere 91.6
1990 Female, age 91, right hemisphere 90.5
1850 Male, age 80, both hemispheres 87.3
2622 Female, age 67, right hemisphere 87.1
2532 Female, age 72, left hemisphere 86.5
2693 Female, age 94, both hemispheres 86.4
Perirhinal gyrus
nTPM: 86.2
2848 Male, age 76, right hemisphere 91.4
2521 Female, age 94, right hemisphere 91.0
1841 Female, age 85, right hemisphere 88.7
1847 Female, age 91, left hemisphere 81.1
1794 Male, age 80, right hemisphere 79.1
Subiculum
nTPM: 100.1
2042 Male, age 76, both hemispheres 111.8
2438 Female, age 94, left hemisphere 106.7
1901 Male, age 80, both hemispheres 104.9
1977 Female, age 85, both hemispheres 94.3
2619 Male, age 74, both hemispheres 92.6
2729 Female, age 91, right hemisphere 90.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 81.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 81.8
Samples: 197

Max nTPM: 204.7
Min nTPM: 34.3
Std nTPM: 27.5
Median nTPM: 74.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 204.7
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 173.4
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 149.7
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 144.9
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 144.0
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 143.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 142.8
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 141.9
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 139.2
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 138.4
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 138.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 151.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 151.5
FF:10169-103B7 60 years, female 154.7
FF:10153-102I9 76 years, female 148.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 60.4
Pig sample Sample description nTPM
Subiculum
nTPM: 51.2
Samples: 4

Max nTPM: 57.1
Min nTPM: 45.4
Sample A Female 57.1
Sample B Female 45.4
Sample C Male 45.9
Sample D Male 56.2
Dorsal hippocampus
nTPM: 60.4
Samples: 4

Max nTPM: 74.1
Min nTPM: 46.3
Sample A Female 70.4
Sample B Female 50.9
Sample C Male 74.1
Sample D Male 46.3
Entorhinal cortex
nTPM: 49.3
Samples: 4

Max nTPM: 52.1
Min nTPM: 46.5
Sample A Female 49.5
Sample B Female 52.1
Sample C Male 48.9
Sample D Male 46.5
Ventral hippocampus
nTPM: 47.2
Samples: 4

Max nTPM: 57.7
Min nTPM: 30.8
Sample A Female 57.7
Sample B Female 47.0
Sample C Male 30.8
Sample D Male 53.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 31.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 31.6
Samples: 4

Max nTPM: 33.4
Min nTPM: 30.7
Sample A Male 33.4
Sample B Male 31.4
Sample C Female 30.7
Sample D Female 30.9
Hippocampal formation
nTPM: 27.2
Samples: 4

Max nTPM: 28.6
Min nTPM: 25.3
Sample A Male 28.6
Sample B Male 28.2
Sample C Female 26.7
Sample D Female 25.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
74635451 Antisense, RP_060215_03_H05, Mouse strain C57BL/6J (56 days, male) 1.7

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