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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
114.6
nTPM
HPA Brain:
146.9
nTPM
GTEx:
114.6
nTPM
FANTOM5:
265.5
Scaled Tags Per Million
Mouse:
37.1
nTPM
Allen mouse:
14.2
Expression energy
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
114.6
GTEx sample id
Sample description
nTPM
Brain - Hippocampus Average nTPM: 114.6
Samples: 197
Max nTPM: 388.5
Min nTPM: 16.5
Std nTPM: 72.0
Median nTPM: 96.3
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
388.5
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
365.5
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
354.0
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
350.5
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
328.6
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
319.1
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
301.5
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
298.3
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
283.6
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
252.5
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
250.1
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
246.0
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
233.8
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
231.0
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
221.6
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
218.4
GTEX-X4EP-0011-R1A-SM-3P624
60-69 years, female
217.8
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
207.1
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
202.3
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
199.2
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
195.7
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
193.9
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
192.4
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
188.7
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
187.0
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
182.8
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
182.2
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
180.5
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
178.4
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
178.2
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
177.9
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
177.4
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
173.6
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
171.9
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
171.1
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
170.2
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
168.2
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
167.4
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
167.2
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
166.7
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
165.3
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
162.2
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
161.7
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
160.9
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
159.4
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
159.2
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
158.1
GTEX-16NPV-0011-R1b-SM-7MGVZ
50-59 years, female
158.0
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
156.1
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
154.9
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
154.7
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
153.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
152.1
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
148.9
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
148.2
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
144.6
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
144.3
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
144.1
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
141.5
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
141.3
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
138.1
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
137.2
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
136.1
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
136.0
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
135.0
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
134.3
GTEX-1HR98-0011-R1a-SM-ARZLQ
60-69 years, male
133.3
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
129.8
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
129.3
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
128.8
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
126.0
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
125.3
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
123.7
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
122.5
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
122.1
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
121.3
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
119.9
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
119.8
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
117.3
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
115.3
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
114.8
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
114.0
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
113.9
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
112.3
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
110.3
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
110.2
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
108.4
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
107.4
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
107.1
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
106.7
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
104.5
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
103.4
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
100.9
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
100.4
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
100.1
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
99.9
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
99.1
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
98.9
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
96.3
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
95.6
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
95.5
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
94.5
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
94.1
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
92.4
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
91.2
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
90.7
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
89.6
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
89.2
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
89.0
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
88.0
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
85.8
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
85.4
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
82.4
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
82.4
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
82.3
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
82.2
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
81.4
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
80.5
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
80.3
GTEX-1J8Q2-0011-R1a-SM-D4P2D
60-69 years, male
79.7
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
78.6
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
77.3
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
74.3
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
74.0
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
73.8
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
72.8
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
70.1
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
69.2
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
69.0
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
68.9
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
68.8
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
68.6
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
68.3
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
67.3
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
67.1
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
67.1
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
67.1
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
65.7
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
65.7
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
65.1
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
64.9
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
64.3
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
63.6
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
63.5
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
63.0
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
62.7
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
62.2
GTEX-1GF9V-0011-R1a-SM-CKZNQ
60-69 years, male
61.9
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
61.2
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
59.3
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
59.1
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
59.1
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
58.7
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
58.4
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
58.0
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
57.4
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
57.4
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
56.8
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
56.1
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
55.4
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
55.0
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
54.5
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
54.5
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
51.8
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
51.5
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
51.5
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
51.1
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
50.4
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
49.8
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
49.1
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
49.0
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
45.3
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
43.9
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
42.4
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
41.7
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
41.7
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
41.7
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
41.2
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
39.6
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
38.9
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
38.3
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
37.2
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
37.0
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
35.6
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
35.3
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
34.1
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
33.4
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
33.3
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
33.2
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
33.1
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
32.3
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
32.2
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
31.0
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
26.4
GTEX-P44G-0011-R1A-SM-2I3FE
30-39 years, male
22.8
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
18.3
GTEX-1EWIQ-0011-R1a-SM-9OSX7
70-79 years, female
16.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
37.1
Mouse sample
Sample description
nTPM
Entorhinal cortex nTPM: 26.2
Samples: 4
Max nTPM: 30.6
Min nTPM: 24.4
Sample A
Male
24.4
Sample B
Male
24.4
Sample C
Female
25.4
Sample D
Female
30.6
Hippocampal formation nTPM: 37.1
Samples: 4
Max nTPM: 41.9
Min nTPM: 34.1
Sample A
Male
34.1
Sample B
Male
41.9
Sample C
Female
36.9
Sample D
Female
35.6
HIPPOCAMPAL FORMATION - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.