HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:28.1 nTPM
HPA Brain:28.4 nTPM
GTEx:28.1 nTPM
FANTOM5:60.3 Scaled Tags Per Million
Pig:16.7 nTPM
Mouse:31.7 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA057160
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.4
Sample id Sample description nTPM
Hippocampus
nTPM: 24.6
2148 Female, age 91, left hemisphere 28.1
2621 Female, age 67, right hemisphere 27.4
2529 Female, age 94, left hemisphere 24.3
1855 Male, age 76, left hemisphere 22.7
1911 Female, age 85, right hemisphere 22.6
1898 Male, age 80, left hemisphere 22.5
Dentate gyrus
nTPM: 27.4
2531 Female, age 67, both hemispheres 31.4
2246 Female, age 85, both hemispheres 29.0
2530 Female, age 94, left hemisphere 28.2
2528 Male, age 74, both hemispheres 27.8
1927 Female, age 91, both hemispheres 24.9
2010 Male, age 76, both hemispheres 23.4
Entorhinal gyrus
nTPM: 28.4
2613 Female, age 94, left hemisphere 31.6
1787 Male, age 76, left hemisphere 29.6
2764 Male, age 80, right hemisphere 29.6
1938 Female, age 85, left hemisphere 27.4
2686 Male, age 75, right hemisphere 26.3
2117 Female, age 91, right hemisphere 25.9
Hippocampus, CA1
nTPM: 24.3
2045 Male, age 76, both hemispheres 27.8
2749 Male, age 80, left hemisphere 24.8
2527 Male, age 74, both hemispheres 24.0
2082 Female, age 91, right hemisphere 23.2
1873 Female, age 85, both hemispheres 21.8
Hippocampus, CA2
nTPM: 24.0
1940 Female, age 85, left hemisphere 25.8
2437 Female, age 94, left hemisphere 25.5
2113 Female, age 91, right hemisphere 24.8
2249 Male, age 74, both hemispheres 23.8
1963 Male, age 80, left hemisphere 23.1
1892 Male, age 76, both hemispheres 20.8
Hippocampus, CA3
nTPM: 28.2
2620 Female, age 94, left hemisphere 41.5
2861 Female, age 67, both hemispheres 37.6
2436 Male, age 74, both hemispheres 25.5
2137 Male, age 80, left hemisphere 23.9
1891 Female, age 85, both hemispheres 21.4
1867 Male, age 76, both hemispheres 19.1
Parahippocampal cortex
nTPM: 25.7
2532 Female, age 72, left hemisphere 31.9
2622 Female, age 67, right hemisphere 31.9
2245 Female, age 91, both hemispheres 27.1
2693 Female, age 94, both hemispheres 27.0
2250 Female, age 67, right hemisphere 26.3
2692 Male, age 74, both hemispheres 26.3
1850 Male, age 80, both hemispheres 25.2
1990 Female, age 91, right hemisphere 24.0
1933 Female, age 85, both hemispheres 19.8
2018 Male, age 76, both hemispheres 17.3
Perirhinal gyrus
nTPM: 24.9
1794 Male, age 80, right hemisphere 29.5
2848 Male, age 76, right hemisphere 25.2
2521 Female, age 94, right hemisphere 24.9
1841 Female, age 85, right hemisphere 22.7
1847 Female, age 91, left hemisphere 22.2
Subiculum
nTPM: 23.1
2619 Male, age 74, both hemispheres 26.5
2729 Female, age 91, right hemisphere 24.9
1977 Female, age 85, both hemispheres 24.6
2042 Male, age 76, both hemispheres 24.4
2438 Female, age 94, left hemisphere 20.0
1901 Male, age 80, both hemispheres 18.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.1
Samples: 197

Max nTPM: 46.7
Min nTPM: 11.0
Std nTPM: 7.5
Median nTPM: 27.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 46.7
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 45.1
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 44.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 43.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 43.2
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 43.0
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 42.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 42.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 42.1
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 41.9
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 41.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 60.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 60.3
FF:10169-103B7 60 years, female 66.4
FF:10153-102I9 76 years, female 54.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.7
Pig sample Sample description nTPM
Subiculum
nTPM: 14.1
Samples: 4

Max nTPM: 14.9
Min nTPM: 12.6
Sample A Female 14.9
Sample B Female 14.0
Sample C Male 14.8
Sample D Male 12.6
Dorsal hippocampus
nTPM: 15.1
Samples: 4

Max nTPM: 17.3
Min nTPM: 12.0
Sample A Female 17.3
Sample B Female 16.5
Sample C Male 14.7
Sample D Male 12.0
Entorhinal cortex
nTPM: 12.8
Samples: 4

Max nTPM: 13.8
Min nTPM: 10.8
Sample A Female 13.7
Sample B Female 10.8
Sample C Male 13.8
Sample D Male 12.8
Ventral hippocampus
nTPM: 16.7
Samples: 4

Max nTPM: 22.6
Min nTPM: 12.1
Sample A Female 15.2
Sample B Female 12.1
Sample C Male 22.6
Sample D Male 16.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 31.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 30.4
Samples: 4

Max nTPM: 31.5
Min nTPM: 29.6
Sample A Male 30.5
Sample B Male 29.6
Sample C Female 31.5
Sample D Female 29.8
Hippocampal formation
nTPM: 31.7
Samples: 4

Max nTPM: 34.5
Min nTPM: 29.8
Sample A Male 34.5
Sample B Male 29.8
Sample C Female 31.3
Sample D Female 31.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
76081928 Antisense, RP_060626_01_A08, Mouse strain C57BL/6J (56 days, male) 2.0
71021168 Antisense, RP_050526_04_B11, Mouse strain C57BL/6J (56 days, male) 1.7
112644308 Antisense, RP_110421_01_B04, Mouse strain C57BL/6J (56 days, male) 1.4

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