HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:6.5 nTPM
HPA Brain:26.9 nTPM
GTEx:6.5 nTPM
FANTOM5:17.7 Scaled Tags Per Million
Pig:27.8 nTPM
Mouse:28.2 nTPM
Allen mouse:6.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA016570
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.9
Sample id Sample description nTPM
Hippocampus
nTPM: 23.7
2148 Female, age 91, left hemisphere 26.5
2621 Female, age 67, right hemisphere 24.8
1898 Male, age 80, left hemisphere 23.5
2529 Female, age 94, left hemisphere 23.5
1855 Male, age 76, left hemisphere 22.2
1911 Female, age 85, right hemisphere 21.7
Dentate gyrus
nTPM: 23.8
2010 Male, age 76, both hemispheres 26.7
2531 Female, age 67, both hemispheres 26.0
2530 Female, age 94, left hemisphere 23.9
1927 Female, age 91, both hemispheres 23.1
2246 Female, age 85, both hemispheres 21.7
2528 Male, age 74, both hemispheres 21.3
Entorhinal gyrus
nTPM: 26.5
2613 Female, age 94, left hemisphere 32.8
1938 Female, age 85, left hemisphere 27.5
1787 Male, age 76, left hemisphere 25.1
2686 Male, age 75, right hemisphere 24.7
2764 Male, age 80, right hemisphere 24.7
2117 Female, age 91, right hemisphere 24.0
Hippocampus, CA1
nTPM: 23.9
2749 Male, age 80, left hemisphere 28.0
2045 Male, age 76, both hemispheres 25.7
2527 Male, age 74, both hemispheres 23.3
1873 Female, age 85, both hemispheres 21.8
2082 Female, age 91, right hemisphere 20.5
Hippocampus, CA2
nTPM: 22.3
1963 Male, age 80, left hemisphere 24.8
2437 Female, age 94, left hemisphere 23.3
1892 Male, age 76, both hemispheres 21.9
2249 Male, age 74, both hemispheres 21.4
1940 Female, age 85, left hemisphere 21.3
2113 Female, age 91, right hemisphere 20.9
Hippocampus, CA3
nTPM: 25.2
2861 Female, age 67, both hemispheres 30.9
2436 Male, age 74, both hemispheres 27.7
2620 Female, age 94, left hemisphere 26.9
2137 Male, age 80, left hemisphere 25.2
1867 Male, age 76, both hemispheres 22.0
1891 Female, age 85, both hemispheres 18.8
Parahippocampal cortex
nTPM: 25.7
2622 Female, age 67, right hemisphere 29.5
2245 Female, age 91, both hemispheres 27.8
2532 Female, age 72, left hemisphere 26.3
1933 Female, age 85, both hemispheres 25.8
2692 Male, age 74, both hemispheres 25.2
2018 Male, age 76, both hemispheres 24.9
1850 Male, age 80, both hemispheres 24.7
2693 Female, age 94, both hemispheres 24.7
1990 Female, age 91, right hemisphere 24.2
2250 Female, age 67, right hemisphere 24.2
Perirhinal gyrus
nTPM: 26.9
1794 Male, age 80, right hemisphere 29.4
1841 Female, age 85, right hemisphere 27.5
1847 Female, age 91, left hemisphere 27.2
2521 Female, age 94, right hemisphere 26.7
2848 Male, age 76, right hemisphere 23.8
Subiculum
nTPM: 22.8
2619 Male, age 74, both hemispheres 26.0
2729 Female, age 91, right hemisphere 23.8
1977 Female, age 85, both hemispheres 22.9
2438 Female, age 94, left hemisphere 22.2
2042 Male, age 76, both hemispheres 21.1
1901 Male, age 80, both hemispheres 20.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 6.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 6.5
Samples: 197

Max nTPM: 11.7
Min nTPM: 2.8
Std nTPM: 1.6
Median nTPM: 6.5
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 11.7
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 11.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 10.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 10.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 10.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 9.9
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 9.7
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 9.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 9.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 9.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 9.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.7
FF:10153-102I9 76 years, female 23.0
FF:10169-103B7 60 years, female 12.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 27.8
Pig sample Sample description nTPM
Subiculum
nTPM: 27.0
Samples: 4

Max nTPM: 27.8
Min nTPM: 25.4
Sample A Female 25.4
Sample B Female 27.8
Sample C Male 27.8
Sample D Male 26.9
Dorsal hippocampus
nTPM: 25.6
Samples: 4

Max nTPM: 28.4
Min nTPM: 22.5
Sample A Female 22.5
Sample B Female 28.3
Sample C Male 23.2
Sample D Male 28.4
Entorhinal cortex
nTPM: 27.8
Samples: 4

Max nTPM: 29.1
Min nTPM: 25.8
Sample A Female 28.6
Sample B Female 25.8
Sample C Male 27.6
Sample D Male 29.1
Ventral hippocampus
nTPM: 25.8
Samples: 4

Max nTPM: 27.1
Min nTPM: 24.8
Sample A Female 24.8
Sample B Female 27.1
Sample C Male 25.5
Sample D Male 25.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 28.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.2
Samples: 4

Max nTPM: 33.0
Min nTPM: 26.2
Sample A Male 26.2
Sample B Male 27.2
Sample C Female 26.3
Sample D Female 33.0
Hippocampal formation
nTPM: 27.5
Samples: 4

Max nTPM: 30.8
Min nTPM: 23.8
Sample A Male 25.8
Sample B Male 29.6
Sample C Female 30.8
Sample D Female 23.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.2
70305072 Antisense, RP_050609_03_B10, Mouse strain C57BL/6J (56 days, male) 12.4
70919788 Antisense, RP_050713_02_A10, Mouse strain C57BL/6J (56 days, male) 0.0

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