HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:100.3 nTPM
HPA Brain:46.4 nTPM
GTEx:100.3 nTPM
FANTOM5:138.6 Scaled Tags Per Million
Pig:71.5 nTPM
Mouse:36.6 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020429
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 46.4
Sample id Sample description nTPM
Hippocampus
nTPM: 46.4
2621 Female, age 67, right hemisphere 52.2
1855 Male, age 76, left hemisphere 50.1
1898 Male, age 80, left hemisphere 46.8
2529 Female, age 94, left hemisphere 46.3
1911 Female, age 85, right hemisphere 42.2
2148 Female, age 91, left hemisphere 41.0
Dentate gyrus
nTPM: 38.7
2530 Female, age 94, left hemisphere 42.6
2246 Female, age 85, both hemispheres 41.1
1927 Female, age 91, both hemispheres 38.8
2528 Male, age 74, both hemispheres 37.6
2010 Male, age 76, both hemispheres 37.5
2531 Female, age 67, both hemispheres 34.8
Entorhinal gyrus
nTPM: 42.0
1938 Female, age 85, left hemisphere 47.7
2117 Female, age 91, right hemisphere 46.6
2764 Male, age 80, right hemisphere 42.8
2686 Male, age 75, right hemisphere 41.2
1787 Male, age 76, left hemisphere 37.1
2613 Female, age 94, left hemisphere 36.5
Hippocampus, CA1
nTPM: 43.5
2527 Male, age 74, both hemispheres 50.1
2749 Male, age 80, left hemisphere 48.3
1873 Female, age 85, both hemispheres 43.0
2045 Male, age 76, both hemispheres 40.4
2082 Female, age 91, right hemisphere 35.5
Hippocampus, CA2
nTPM: 41.5
1892 Male, age 76, both hemispheres 46.3
1963 Male, age 80, left hemisphere 42.1
2437 Female, age 94, left hemisphere 40.4
2113 Female, age 91, right hemisphere 40.3
1940 Female, age 85, left hemisphere 40.0
2249 Male, age 74, both hemispheres 39.8
Hippocampus, CA3
nTPM: 40.1
1867 Male, age 76, both hemispheres 45.2
1891 Female, age 85, both hemispheres 42.9
2436 Male, age 74, both hemispheres 39.8
2137 Male, age 80, left hemisphere 39.7
2620 Female, age 94, left hemisphere 39.7
2861 Female, age 67, both hemispheres 33.2
Parahippocampal cortex
nTPM: 43.5
1850 Male, age 80, both hemispheres 48.5
1933 Female, age 85, both hemispheres 45.2
2692 Male, age 74, both hemispheres 45.2
2245 Female, age 91, both hemispheres 44.8
2018 Male, age 76, both hemispheres 43.9
2250 Female, age 67, right hemisphere 43.6
2532 Female, age 72, left hemisphere 43.4
2693 Female, age 94, both hemispheres 42.1
2622 Female, age 67, right hemisphere 40.4
1990 Female, age 91, right hemisphere 38.2
Perirhinal gyrus
nTPM: 39.3
1841 Female, age 85, right hemisphere 42.2
2521 Female, age 94, right hemisphere 39.8
1794 Male, age 80, right hemisphere 39.6
2848 Male, age 76, right hemisphere 38.0
1847 Female, age 91, left hemisphere 36.7
Subiculum
nTPM: 43.9
1901 Male, age 80, both hemispheres 48.8
2042 Male, age 76, both hemispheres 48.4
2438 Female, age 94, left hemisphere 48.4
1977 Female, age 85, both hemispheres 40.3
2619 Male, age 74, both hemispheres 40.0
2729 Female, age 91, right hemisphere 37.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 100.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 100.3
Samples: 197

Max nTPM: 213.1
Min nTPM: 29.4
Std nTPM: 28.7
Median nTPM: 98.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 213.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 182.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 173.0
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 166.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 160.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 160.3
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 158.8
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 152.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 152.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 150.8
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 149.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 138.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 138.6
FF:10169-103B7 60 years, female 177.5
FF:10153-102I9 76 years, female 99.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 71.5
Pig sample Sample description nTPM
Subiculum
nTPM: 66.2
Samples: 4

Max nTPM: 88.2
Min nTPM: 55.4
Sample A Female 88.2
Sample B Female 55.4
Sample C Male 58.1
Sample D Male 63.2
Dorsal hippocampus
nTPM: 67.3
Samples: 4

Max nTPM: 82.0
Min nTPM: 51.1
Sample A Female 82.0
Sample B Female 51.1
Sample C Male 76.9
Sample D Male 59.3
Entorhinal cortex
nTPM: 71.5
Samples: 4

Max nTPM: 83.5
Min nTPM: 54.8
Sample A Female 69.9
Sample B Female 77.8
Sample C Male 83.5
Sample D Male 54.8
Ventral hippocampus
nTPM: 61.2
Samples: 4

Max nTPM: 64.8
Min nTPM: 54.6
Sample A Female 61.3
Sample B Female 54.6
Sample C Male 64.1
Sample D Male 64.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 36.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 35.7
Samples: 4

Max nTPM: 38.2
Min nTPM: 31.4
Sample A Male 35.8
Sample B Male 37.4
Sample C Female 38.2
Sample D Female 31.4
Hippocampal formation
nTPM: 36.6
Samples: 4

Max nTPM: 40.3
Min nTPM: 33.7
Sample A Male 40.3
Sample B Male 33.7
Sample C Female 35.9
Sample D Female 36.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
79544852 Antisense, RP_071101_01_A11, Mouse strain C57BL/6J (56 days, male) 0.6

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