HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:13.0 nTPM
HPA Brain:24.7 nTPM
GTEx:13.0 nTPM
FANTOM5:27.4 Scaled Tags Per Million
Pig:11.5 nTPM
Mouse:7.6 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043928
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.7
Sample id Sample description nTPM
Hippocampus
nTPM: 22.5
2148 Female, age 91, left hemisphere 26.8
2529 Female, age 94, left hemisphere 24.7
1911 Female, age 85, right hemisphere 23.7
1855 Male, age 76, left hemisphere 21.2
2621 Female, age 67, right hemisphere 19.5
1898 Male, age 80, left hemisphere 19.0
Dentate gyrus
nTPM: 24.7
2528 Male, age 74, both hemispheres 28.4
1927 Female, age 91, both hemispheres 26.1
2531 Female, age 67, both hemispheres 25.9
2010 Male, age 76, both hemispheres 23.6
2246 Female, age 85, both hemispheres 22.4
2530 Female, age 94, left hemisphere 21.7
Entorhinal gyrus
nTPM: 23.6
2764 Male, age 80, right hemisphere 28.7
2613 Female, age 94, left hemisphere 23.6
1938 Female, age 85, left hemisphere 23.2
1787 Male, age 76, left hemisphere 22.9
2686 Male, age 75, right hemisphere 22.6
2117 Female, age 91, right hemisphere 20.6
Hippocampus, CA1
nTPM: 23.5
2082 Female, age 91, right hemisphere 28.4
2527 Male, age 74, both hemispheres 23.0
1873 Female, age 85, both hemispheres 22.4
2045 Male, age 76, both hemispheres 22.4
2749 Male, age 80, left hemisphere 21.0
Hippocampus, CA2
nTPM: 23.8
2437 Female, age 94, left hemisphere 27.4
2113 Female, age 91, right hemisphere 25.3
2249 Male, age 74, both hemispheres 24.6
1963 Male, age 80, left hemisphere 22.4
1940 Female, age 85, left hemisphere 22.1
1892 Male, age 76, both hemispheres 21.2
Hippocampus, CA3
nTPM: 24.2
2137 Male, age 80, left hemisphere 26.5
2620 Female, age 94, left hemisphere 26.3
2436 Male, age 74, both hemispheres 25.5
2861 Female, age 67, both hemispheres 22.5
1867 Male, age 76, both hemispheres 22.4
1891 Female, age 85, both hemispheres 21.8
Parahippocampal cortex
nTPM: 23.4
1990 Female, age 91, right hemisphere 26.1
2245 Female, age 91, both hemispheres 26.0
1933 Female, age 85, both hemispheres 24.9
2250 Female, age 67, right hemisphere 24.6
2622 Female, age 67, right hemisphere 24.5
2018 Male, age 76, both hemispheres 23.4
2532 Female, age 72, left hemisphere 23.0
1850 Male, age 80, both hemispheres 21.4
2693 Female, age 94, both hemispheres 21.0
2692 Male, age 74, both hemispheres 19.5
Perirhinal gyrus
nTPM: 24.2
2521 Female, age 94, right hemisphere 27.3
1794 Male, age 80, right hemisphere 24.9
1847 Female, age 91, left hemisphere 23.1
2848 Male, age 76, right hemisphere 23.1
1841 Female, age 85, right hemisphere 22.5
Subiculum
nTPM: 23.4
2729 Female, age 91, right hemisphere 26.8
2438 Female, age 94, left hemisphere 25.5
2619 Male, age 74, both hemispheres 24.6
1977 Female, age 85, both hemispheres 22.3
1901 Male, age 80, both hemispheres 21.3
2042 Male, age 76, both hemispheres 19.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.0
Samples: 197

Max nTPM: 30.9
Min nTPM: 6.1
Std nTPM: 4.5
Median nTPM: 12.0
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 30.9
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 28.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 28.4
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 25.3
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 25.1
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 23.4
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 23.4
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 22.8
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 22.8
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 22.4
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 21.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.4
FF:10153-102I9 76 years, female 35.1
FF:10169-103B7 60 years, female 19.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.5
Pig sample Sample description nTPM
Subiculum
nTPM: 10.5
Samples: 4

Max nTPM: 13.7
Min nTPM: 7.9
Sample A Female 13.7
Sample B Female 9.6
Sample C Male 10.7
Sample D Male 7.9
Dorsal hippocampus
nTPM: 10.9
Samples: 4

Max nTPM: 13.1
Min nTPM: 7.9
Sample A Female 13.1
Sample B Female 12.3
Sample C Male 10.3
Sample D Male 7.9
Entorhinal cortex
nTPM: 11.4
Samples: 4

Max nTPM: 12.0
Min nTPM: 11.0
Sample A Female 11.3
Sample B Female 11.1
Sample C Male 12.0
Sample D Male 11.0
Ventral hippocampus
nTPM: 11.6
Samples: 4

Max nTPM: 14.6
Min nTPM: 8.4
Sample A Female 10.7
Sample B Female 8.4
Sample C Male 14.6
Sample D Male 12.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.7
Samples: 4

Max nTPM: 8.4
Min nTPM: 6.9
Sample A Male 7.7
Sample B Male 7.6
Sample C Female 6.9
Sample D Female 8.4
Hippocampal formation
nTPM: 7.4
Samples: 4

Max nTPM: 7.9
Min nTPM: 6.5
Sample A Male 6.5
Sample B Male 7.6
Sample C Female 7.5
Sample D Female 7.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
73834403 Antisense, RP_051212_03_H04, Mouse strain C57BL/6J (56 days, male) 0.6

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