HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:130.7 nTPM
HPA Brain:272.7 nTPM
GTEx:130.7 nTPM
FANTOM5:255.3 Scaled Tags Per Million
Pig:166.4 nTPM
Mouse:285.3 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA056851
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 272.7
Sample id Sample description nTPM
Hippocampus
nTPM: 142.8
1898 Male, age 80, left hemisphere 188.8
2529 Female, age 94, left hemisphere 153.0
1911 Female, age 85, right hemisphere 139.1
2621 Female, age 67, right hemisphere 137.5
1855 Male, age 76, left hemisphere 126.9
2148 Female, age 91, left hemisphere 111.3
Dentate gyrus
nTPM: 132.1
2530 Female, age 94, left hemisphere 186.8
2010 Male, age 76, both hemispheres 150.1
1927 Female, age 91, both hemispheres 123.9
2246 Female, age 85, both hemispheres 123.5
2528 Male, age 74, both hemispheres 112.5
2531 Female, age 67, both hemispheres 96.0
Entorhinal gyrus
nTPM: 182.6
1787 Male, age 76, left hemisphere 223.2
1938 Female, age 85, left hemisphere 199.5
2764 Male, age 80, right hemisphere 198.5
2613 Female, age 94, left hemisphere 165.9
2686 Male, age 75, right hemisphere 163.8
2117 Female, age 91, right hemisphere 144.5
Hippocampus, CA1
nTPM: 153.3
2749 Male, age 80, left hemisphere 240.8
2082 Female, age 91, right hemisphere 144.5
2527 Male, age 74, both hemispheres 133.9
1873 Female, age 85, both hemispheres 129.6
2045 Male, age 76, both hemispheres 117.5
Hippocampus, CA2
nTPM: 170.8
1940 Female, age 85, left hemisphere 248.6
1892 Male, age 76, both hemispheres 192.1
2113 Female, age 91, right hemisphere 160.4
1963 Male, age 80, left hemisphere 145.2
2249 Male, age 74, both hemispheres 139.4
2437 Female, age 94, left hemisphere 139.2
Hippocampus, CA3
nTPM: 148.0
2137 Male, age 80, left hemisphere 237.4
1867 Male, age 76, both hemispheres 210.5
1891 Female, age 85, both hemispheres 145.5
2436 Male, age 74, both hemispheres 107.1
2620 Female, age 94, left hemisphere 94.4
2861 Female, age 67, both hemispheres 93.0
Parahippocampal cortex
nTPM: 198.1
1850 Male, age 80, both hemispheres 305.7
2532 Female, age 72, left hemisphere 227.5
2018 Male, age 76, both hemispheres 221.2
1933 Female, age 85, both hemispheres 216.1
2250 Female, age 67, right hemisphere 188.7
2245 Female, age 91, both hemispheres 181.3
1990 Female, age 91, right hemisphere 178.3
2622 Female, age 67, right hemisphere 172.5
2693 Female, age 94, both hemispheres 163.1
2692 Male, age 74, both hemispheres 126.5
Perirhinal gyrus
nTPM: 272.7
1841 Female, age 85, right hemisphere 332.7
1794 Male, age 80, right hemisphere 301.6
1847 Female, age 91, left hemisphere 283.9
2521 Female, age 94, right hemisphere 241.6
2848 Male, age 76, right hemisphere 203.9
Subiculum
nTPM: 163.5
1901 Male, age 80, both hemispheres 210.3
1977 Female, age 85, both hemispheres 197.5
2042 Male, age 76, both hemispheres 187.5
2438 Female, age 94, left hemisphere 144.0
2619 Male, age 74, both hemispheres 123.2
2729 Female, age 91, right hemisphere 118.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 130.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 130.7
Samples: 197

Max nTPM: 608.1
Min nTPM: 52.8
Std nTPM: 71.6
Median nTPM: 107.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 608.1
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 387.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 376.6
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 359.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 338.4
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 337.5
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 331.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 327.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 313.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 274.1
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 271.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 255.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 255.3
FF:10153-102I9 76 years, female 266.7
FF:10169-103B7 60 years, female 244.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 166.4
Pig sample Sample description nTPM
Subiculum
nTPM: 122.0
Samples: 4

Max nTPM: 146.5
Min nTPM: 106.2
Sample A Female 146.5
Sample B Female 106.2
Sample C Male 107.3
Sample D Male 128.1
Dorsal hippocampus
nTPM: 108.9
Samples: 4

Max nTPM: 131.3
Min nTPM: 79.9
Sample A Female 131.3
Sample B Female 101.6
Sample C Male 122.6
Sample D Male 79.9
Entorhinal cortex
nTPM: 166.4
Samples: 4

Max nTPM: 177.2
Min nTPM: 143.3
Sample A Female 168.3
Sample B Female 177.2
Sample C Male 176.9
Sample D Male 143.3
Ventral hippocampus
nTPM: 93.6
Samples: 4

Max nTPM: 104.5
Min nTPM: 84.4
Sample A Female 104.5
Sample B Female 84.4
Sample C Male 89.2
Sample D Male 96.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 285.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 285.3
Samples: 4

Max nTPM: 378.3
Min nTPM: 218.2
Sample A Male 280.4
Sample B Male 378.3
Sample C Female 218.2
Sample D Female 264.4
Hippocampal formation
nTPM: 136.5
Samples: 4

Max nTPM: 195.5
Min nTPM: 111.8
Sample A Male 195.5
Sample B Male 111.8
Sample C Female 118.9
Sample D Female 119.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
74357597 Antisense, RP_060117_01_A12, Mouse strain C57BL/6J (56 days, male) 0.1

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