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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
148.1
nTPM
HPA Brain:
166.0
nTPM
GTEx:
148.1
nTPM
FANTOM5:
263.4
Scaled Tags Per Million
Pig:
143.0
nTPM
Mouse:
115.4
nTPM
Allen mouse:
0.0
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
166.0
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 144.7
1870
Female, age 42, unknown
171.0
2666
Male, age 74, left hemisphere
167.8
2019
Male, age 18, unknown
153.4
2586
Male, age 75, left hemisphere
151.6
2828
Female, age 72, unknown
143.5
1827
Male, age 72, unknown
143.2
2411
Female, age 72, unknown
138.7
1833
Male, age 53, unknown
133.6
1830
Male, age 51, unknown
133.2
2219
Male, age 76, both hemispheres
111.5
Dorsal raphe nucleus nTPM: 141.3
2047
Male, age 72, unknown
149.0
2750
Male, age 76, both hemispheres
143.1
2298
Female, age 72, unknown
142.7
1828
Male, age 53, unknown
136.0
2016
Female, age 72, unknown
135.7
Inferior colliculus nTPM: 120.5
1890
Male, age 53, unknown
132.2
2097
Female, age 72, unknown
128.7
1848
Female, age 42, unknown
114.3
2849
Male, age 72, unknown
106.9
Median raphe nucleus nTPM: 135.8
2220
Male, age 76, midline
135.8
Periaquaductal grey, anterior nTPM: 137.6
2502
Female, age 75, unknown
142.6
1947
Male, age 18, unknown
140.1
1795
Male, age 51, unknown
130.1
Periaquaductal grey, dorsal nTPM: 119.9
1831
Male, age 72, unknown
134.8
1840
Male, age 53, unknown
122.4
2850
Male, age 76, both hemispheres
113.9
2464
Female, age 72, unknown
108.5
Periaquaductal grey, lateral nTPM: 113.5
2053
Male, age 18, unknown
127.0
2272
Male, age 74, both hemispheres
108.2
2140
Male, age 76, both hemispheres
105.4
Pretectal area nTPM: 137.7
2007
Male, age 72, unknown
156.5
1817
Female, age 42, unknown
155.7
1815
Male, age 53, unknown
154.3
1816
Male, age 51, unknown
150.8
2407
Male, age 75, both hemispheres
138.4
1944
Female, age 72, unknown
136.8
2667
Female, age 75, unknown
134.1
2224
Female, age 72, unknown
124.8
2825
Male, age 18, unknown
124.2
2273
Male, age 74, both hemispheres
123.2
2316
Male, age 76, right hemisphere
116.1
Red nucleus nTPM: 158.9
1821
Female, age 72, unknown
185.1
1865
Male, age 51, unknown
176.1
2588
Male, age 74, left hemisphere
172.3
2725
Female, age 75, unknown
167.2
2584
Male, age 75, left hemisphere
164.9
1904
Male, age 53, unknown
163.4
2503
Female, age 72, unknown
163.4
1954
Female, age 42, unknown
147.7
2227
Male, age 72, unknown
144.0
2769
Male, age 72, unknown
143.2
2823
Male, age 76, right hemisphere
139.6
2785
Male, age 18, unknown
139.4
Substantia nigra nTPM: 166.0
1851
Male, age 51, unknown
195.7
2699
Male, age 18, unknown
187.5
1916
Female, age 42, unknown
175.8
2583
Male, age 75, right hemisphere
175.8
2665
Male, age 74, both hemispheres
166.1
2409
Female, age 72, unknown
157.1
1889
Female, age 72, unknown
154.5
2241
Male, age 72, unknown
154.4
1941
Male, age 53, unknown
152.1
2590
Female, age 75, unknown
141.4
Superior colliculus nTPM: 142.7
2587
Male, age 74, left hemisphere
169.8
1913
Female, age 42, unknown
165.8
2668
Female, age 75, unknown
154.3
1995
Male, age 72, unknown
152.7
2664
Male, age 75, both hemispheres
143.5
1796
Male, age 53, unknown
142.8
2087
Female, age 72, unknown
129.7
2261
Male, age 18, unknown
128.1
1895
Male, age 76, right hemisphere
120.3
1839
Male, age 51, unknown
120.2
Ventral tegmental area nTPM: 164.4
2223
Female, age 72, unknown
240.4
1915
Female, age 42, unknown
162.5
1942
Male, age 51, unknown
149.6
2021
Male, age 53, unknown
148.2
2410
Female, age 72, unknown
145.4
2218
Male, age 76, both hemispheres
140.6
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
148.1
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 148.1
Samples: 139
Max nTPM: 427.1
Min nTPM: 83.2
Std nTPM: 45.9
Median nTPM: 137.7
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
427.1
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
311.8
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
270.0
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
267.4
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
246.5
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
231.2
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
225.7
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
213.7
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
211.0
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
208.8
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
204.5
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
204.4
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
199.2
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
196.7
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
196.3
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
193.9
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
193.8
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
192.9
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
192.9
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
188.2
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
187.8
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
185.6
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
185.3
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
183.9
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
181.8
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
181.4
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
177.3
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
175.9
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
174.4
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
172.8
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
171.4
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
170.2
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
169.4
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
166.8
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
166.7
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
166.7
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
166.4
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
165.8
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
163.6
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
163.5
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
163.2
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
163.2
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
162.9
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
161.4
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
161.3
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
159.0
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
156.8
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
156.3
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
155.5
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
155.0
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
153.9
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
153.2
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
153.0
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
152.5
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
151.7
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
150.3
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
149.6
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
148.7
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
147.8
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
147.7
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
143.9
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
143.6
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
142.1
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
141.8
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
141.1
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
140.7
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
138.7
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
138.5
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
137.8
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
137.7
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
137.3
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
135.6
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
135.5
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
134.8
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
133.9
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
133.9
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
133.0
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
132.2
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
132.0
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
131.3
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
131.0
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
130.3
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
130.3
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
129.7
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
129.4
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
128.9
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
128.5
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
128.3
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
128.1
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
127.4
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
126.5
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
126.1
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
125.6
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
124.0
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
123.2
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
123.1
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
122.9
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
122.7
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
121.8
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
121.6
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
121.4
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
121.3
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
121.3
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
121.2
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
121.2
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
120.7
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
119.1
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
119.1
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
118.3
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
117.8
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
117.7
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
117.2
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
115.7
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
115.4
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
114.0
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
112.5
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
112.4
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
112.2
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
108.9
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
107.4
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
107.2
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
106.0
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
105.4
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
104.3
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
101.5
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
101.0
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
99.7
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
98.2
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
96.3
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
94.4
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
93.2
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
93.2
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
92.3
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
90.7
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
89.7
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
88.7
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
87.7
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
85.5
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
83.2
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
115.4
Mouse sample
Sample description
nTPM
Midbrain nTPM: 115.4
Samples: 4
Max nTPM: 122.6
Min nTPM: 98.2
Sample A
Male
118.7
Sample B
Male
122.6
Sample C
Female
98.2
Sample D
Female
122.0
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.