HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:205.9 nTPM
HPA Brain:70.0 nTPM
GTEx:205.9 nTPM
FANTOM5:147.8 Scaled Tags Per Million
Pig:109.0 nTPM
Mouse:228.1 nTPM
Allen mouse:14.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB004082
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 70.0
Sample id Sample description nTPM
Hippocampus
nTPM: 57.1
1898 Male, age 80, left hemisphere 71.9
2621 Female, age 67, right hemisphere 62.8
1855 Male, age 76, left hemisphere 58.6
2148 Female, age 91, left hemisphere 52.8
2529 Female, age 94, left hemisphere 50.8
1911 Female, age 85, right hemisphere 45.7
Dentate gyrus
nTPM: 51.5
1927 Female, age 91, both hemispheres 61.3
2530 Female, age 94, left hemisphere 60.5
2010 Male, age 76, both hemispheres 54.2
2246 Female, age 85, both hemispheres 51.3
2531 Female, age 67, both hemispheres 42.2
2528 Male, age 74, both hemispheres 39.7
Entorhinal gyrus
nTPM: 55.7
1938 Female, age 85, left hemisphere 63.7
2764 Male, age 80, right hemisphere 61.8
1787 Male, age 76, left hemisphere 56.2
2686 Male, age 75, right hemisphere 53.6
2613 Female, age 94, left hemisphere 51.2
2117 Female, age 91, right hemisphere 47.9
Hippocampus, CA1
nTPM: 60.3
2749 Male, age 80, left hemisphere 84.3
1873 Female, age 85, both hemispheres 61.8
2045 Male, age 76, both hemispheres 59.4
2527 Male, age 74, both hemispheres 55.0
2082 Female, age 91, right hemisphere 41.2
Hippocampus, CA2
nTPM: 57.4
1892 Male, age 76, both hemispheres 78.9
1963 Male, age 80, left hemisphere 66.8
2437 Female, age 94, left hemisphere 54.4
2249 Male, age 74, both hemispheres 50.3
1940 Female, age 85, left hemisphere 49.5
2113 Female, age 91, right hemisphere 44.2
Hippocampus, CA3
nTPM: 56.2
2137 Male, age 80, left hemisphere 73.1
1867 Male, age 76, both hemispheres 66.7
2436 Male, age 74, both hemispheres 54.4
1891 Female, age 85, both hemispheres 52.8
2620 Female, age 94, left hemisphere 48.5
2861 Female, age 67, both hemispheres 41.6
Parahippocampal cortex
nTPM: 59.9
1850 Male, age 80, both hemispheres 82.7
2245 Female, age 91, both hemispheres 65.9
2532 Female, age 72, left hemisphere 62.0
1933 Female, age 85, both hemispheres 59.7
2018 Male, age 76, both hemispheres 59.1
2250 Female, age 67, right hemisphere 58.5
1990 Female, age 91, right hemisphere 57.3
2692 Male, age 74, both hemispheres 53.7
2693 Female, age 94, both hemispheres 51.9
2622 Female, age 67, right hemisphere 48.7
Perirhinal gyrus
nTPM: 70.0
1847 Female, age 91, left hemisphere 77.9
1841 Female, age 85, right hemisphere 77.1
1794 Male, age 80, right hemisphere 72.5
2848 Male, age 76, right hemisphere 65.1
2521 Female, age 94, right hemisphere 57.2
Subiculum
nTPM: 54.0
1901 Male, age 80, both hemispheres 63.1
1977 Female, age 85, both hemispheres 60.7
2438 Female, age 94, left hemisphere 55.8
2619 Male, age 74, both hemispheres 53.6
2042 Male, age 76, both hemispheres 52.3
2729 Female, age 91, right hemisphere 38.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 205.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 205.9
Samples: 197

Max nTPM: 551.4
Min nTPM: 94.0
Std nTPM: 69.0
Median nTPM: 188.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 551.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 428.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 398.9
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 392.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 382.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 380.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 374.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 369.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 348.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 344.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 341.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 147.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 147.8
FF:10153-102I9 76 years, female 149.2
FF:10169-103B7 60 years, female 146.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 109.0
Pig sample Sample description nTPM
Subiculum
nTPM: 82.1
Samples: 4

Max nTPM: 112.4
Min nTPM: 71.4
Sample A Female 112.4
Sample B Female 71.5
Sample C Male 72.9
Sample D Male 71.4
Dorsal hippocampus
nTPM: 109.0
Samples: 4

Max nTPM: 147.5
Min nTPM: 80.5
Sample A Female 147.5
Sample B Female 108.5
Sample C Male 99.4
Sample D Male 80.5
Entorhinal cortex
nTPM: 86.5
Samples: 4

Max nTPM: 101.8
Min nTPM: 63.2
Sample A Female 93.8
Sample B Female 101.8
Sample C Male 87.2
Sample D Male 63.2
Ventral hippocampus
nTPM: 93.6
Samples: 4

Max nTPM: 107.3
Min nTPM: 64.7
Sample A Female 101.7
Sample B Female 64.7
Sample C Male 100.6
Sample D Male 107.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 228.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 228.1
Samples: 4

Max nTPM: 247.3
Min nTPM: 199.8
Sample A Male 199.8
Sample B Male 226.3
Sample C Female 239.1
Sample D Female 247.3
Hippocampal formation
nTPM: 227.4
Samples: 4

Max nTPM: 263.3
Min nTPM: 211.2
Sample A Male 263.3
Sample B Male 211.2
Sample C Female 221.0
Sample D Female 214.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.1
393259 Antisense, RP_040809_01_B01, Mouse strain C57BL/6J (56 days, male) 14.1

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