HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:204.4 nTPM
HPA Brain:48.0 nTPM
GTEx:204.4 nTPM
FANTOM5:632.2 Scaled Tags Per Million
Pig:178.5 nTPM
Mouse:36.8 nTPM
Allen mouse:2.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA055312Antibody CAB047343Antibody CAB069914
Glial cells Not detectedNot detectedMedium
Neuronal cells MediumLowHigh






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 48.0
Sample id Sample description nTPM
Hippocampus
nTPM: 46.5
2529 Female, age 94, left hemisphere 50.9
1855 Male, age 76, left hemisphere 47.7
2621 Female, age 67, right hemisphere 46.7
1898 Male, age 80, left hemisphere 46.0
1911 Female, age 85, right hemisphere 45.8
2148 Female, age 91, left hemisphere 42.0
Dentate gyrus
nTPM: 38.6
2010 Male, age 76, both hemispheres 59.9
2246 Female, age 85, both hemispheres 41.2
2530 Female, age 94, left hemisphere 38.6
1927 Female, age 91, both hemispheres 35.9
2528 Male, age 74, both hemispheres 28.2
2531 Female, age 67, both hemispheres 27.5
Entorhinal gyrus
nTPM: 41.7
2117 Female, age 91, right hemisphere 54.8
1938 Female, age 85, left hemisphere 47.2
2686 Male, age 75, right hemisphere 44.9
1787 Male, age 76, left hemisphere 43.8
2764 Male, age 80, right hemisphere 32.3
2613 Female, age 94, left hemisphere 27.4
Hippocampus, CA1
nTPM: 48.0
2749 Male, age 80, left hemisphere 55.9
2045 Male, age 76, both hemispheres 54.8
2527 Male, age 74, both hemispheres 46.7
2082 Female, age 91, right hemisphere 44.6
1873 Female, age 85, both hemispheres 38.0
Hippocampus, CA2
nTPM: 46.3
2437 Female, age 94, left hemisphere 52.1
1940 Female, age 85, left hemisphere 51.7
1892 Male, age 76, both hemispheres 48.9
2113 Female, age 91, right hemisphere 47.6
1963 Male, age 80, left hemisphere 39.2
2249 Male, age 74, both hemispheres 38.3
Hippocampus, CA3
nTPM: 46.1
1867 Male, age 76, both hemispheres 73.6
2137 Male, age 80, left hemisphere 55.5
2436 Male, age 74, both hemispheres 49.7
1891 Female, age 85, both hemispheres 40.7
2861 Female, age 67, both hemispheres 35.9
2620 Female, age 94, left hemisphere 21.2
Parahippocampal cortex
nTPM: 44.9
2018 Male, age 76, both hemispheres 72.3
1933 Female, age 85, both hemispheres 46.4
2250 Female, age 67, right hemisphere 45.9
2245 Female, age 91, both hemispheres 44.3
1850 Male, age 80, both hemispheres 42.4
2622 Female, age 67, right hemisphere 42.3
2692 Male, age 74, both hemispheres 41.4
2532 Female, age 72, left hemisphere 38.7
2693 Female, age 94, both hemispheres 38.5
1990 Female, age 91, right hemisphere 36.8
Perirhinal gyrus
nTPM: 39.2
1841 Female, age 85, right hemisphere 46.1
1794 Male, age 80, right hemisphere 40.9
2521 Female, age 94, right hemisphere 39.0
1847 Female, age 91, left hemisphere 37.6
2848 Male, age 76, right hemisphere 32.2
Subiculum
nTPM: 45.3
2042 Male, age 76, both hemispheres 71.5
2729 Female, age 91, right hemisphere 43.1
2438 Female, age 94, left hemisphere 40.7
2619 Male, age 74, both hemispheres 40.7
1977 Female, age 85, both hemispheres 38.4
1901 Male, age 80, both hemispheres 37.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 204.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 204.4
Samples: 197

Max nTPM: 1219.3
Min nTPM: 61.4
Std nTPM: 129.5
Median nTPM: 165.7
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 1219.3
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 628.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 577.0
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 562.3
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 548.1
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 534.0
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 529.8
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 516.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 475.4
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 467.6
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 441.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 632.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 632.2
FF:10169-103B7 60 years, female 891.1
FF:10153-102I9 76 years, female 373.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 178.5
Pig sample Sample description nTPM
Subiculum
nTPM: 171.3
Samples: 4

Max nTPM: 176.8
Min nTPM: 159.3
Sample A Female 172.8
Sample B Female 159.3
Sample C Male 176.3
Sample D Male 176.8
Dorsal hippocampus
nTPM: 165.3
Samples: 4

Max nTPM: 187.8
Min nTPM: 150.7
Sample A Female 168.6
Sample B Female 150.7
Sample C Male 187.8
Sample D Male 154.2
Entorhinal cortex
nTPM: 168.0
Samples: 4

Max nTPM: 182.0
Min nTPM: 143.8
Sample A Female 170.7
Sample B Female 182.0
Sample C Male 175.4
Sample D Male 143.8
Ventral hippocampus
nTPM: 178.5
Samples: 4

Max nTPM: 182.1
Min nTPM: 175.4
Sample A Female 182.1
Sample B Female 176.8
Sample C Male 179.8
Sample D Male 175.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 36.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 36.3
Samples: 4

Max nTPM: 39.8
Min nTPM: 29.9
Sample A Male 39.6
Sample B Male 39.8
Sample C Female 36.0
Sample D Female 29.9
Hippocampal formation
nTPM: 36.8
Samples: 4

Max nTPM: 41.4
Min nTPM: 32.7
Sample A Male 41.4
Sample B Male 38.5
Sample C Female 34.5
Sample D Female 32.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.3
69873409 Antisense, RP_050512_01_B12, Mouse strain C57BL/6J (56 days, male) 2.3

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