HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:21.3 nTPM
HPA Brain:69.5 nTPM
GTEx:21.3 nTPM
FANTOM5:67.2 Scaled Tags Per Million
Pig:45.2 nTPM
Mouse:38.3 nTPM
Allen mouse:3.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043727Antibody HPA048153
Glial cells MediumMedium
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 69.5
Sample id Sample description nTPM
Hippocampus
nTPM: 59.2
1898 Male, age 80, left hemisphere 63.1
2621 Female, age 67, right hemisphere 61.0
2529 Female, age 94, left hemisphere 60.5
2148 Female, age 91, left hemisphere 60.1
1911 Female, age 85, right hemisphere 57.9
1855 Male, age 76, left hemisphere 52.4
Dentate gyrus
nTPM: 59.0
1927 Female, age 91, both hemispheres 63.8
2531 Female, age 67, both hemispheres 61.2
2246 Female, age 85, both hemispheres 60.4
2528 Male, age 74, both hemispheres 59.2
2010 Male, age 76, both hemispheres 56.3
2530 Female, age 94, left hemisphere 53.3
Entorhinal gyrus
nTPM: 57.5
1938 Female, age 85, left hemisphere 65.1
1787 Male, age 76, left hemisphere 60.7
2764 Male, age 80, right hemisphere 58.9
2613 Female, age 94, left hemisphere 58.6
2117 Female, age 91, right hemisphere 53.5
2686 Male, age 75, right hemisphere 48.2
Hippocampus, CA1
nTPM: 63.8
2749 Male, age 80, left hemisphere 79.2
2527 Male, age 74, both hemispheres 61.8
2045 Male, age 76, both hemispheres 60.7
1873 Female, age 85, both hemispheres 59.3
2082 Female, age 91, right hemisphere 57.7
Hippocampus, CA2
nTPM: 57.4
1892 Male, age 76, both hemispheres 61.3
2113 Female, age 91, right hemisphere 58.8
1940 Female, age 85, left hemisphere 58.2
2249 Male, age 74, both hemispheres 57.2
1963 Male, age 80, left hemisphere 57.0
2437 Female, age 94, left hemisphere 51.7
Hippocampus, CA3
nTPM: 62.4
2137 Male, age 80, left hemisphere 81.2
2436 Male, age 74, both hemispheres 65.1
1891 Female, age 85, both hemispheres 64.3
2620 Female, age 94, left hemisphere 56.7
1867 Male, age 76, both hemispheres 56.1
2861 Female, age 67, both hemispheres 51.2
Parahippocampal cortex
nTPM: 56.4
1850 Male, age 80, both hemispheres 73.6
2018 Male, age 76, both hemispheres 57.4
1990 Female, age 91, right hemisphere 57.3
2532 Female, age 72, left hemisphere 57.1
2245 Female, age 91, both hemispheres 57.0
1933 Female, age 85, both hemispheres 56.7
2693 Female, age 94, both hemispheres 53.3
2250 Female, age 67, right hemisphere 52.8
2692 Male, age 74, both hemispheres 51.4
2622 Female, age 67, right hemisphere 47.1
Perirhinal gyrus
nTPM: 69.5
1847 Female, age 91, left hemisphere 71.6
1794 Male, age 80, right hemisphere 70.2
2848 Male, age 76, right hemisphere 68.8
1841 Female, age 85, right hemisphere 68.4
2521 Female, age 94, right hemisphere 68.4
Subiculum
nTPM: 58.8
1901 Male, age 80, both hemispheres 67.3
1977 Female, age 85, both hemispheres 62.1
2438 Female, age 94, left hemisphere 57.7
2619 Male, age 74, both hemispheres 56.0
2042 Male, age 76, both hemispheres 55.2
2729 Female, age 91, right hemisphere 54.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.3
Samples: 197

Max nTPM: 31.9
Min nTPM: 12.9
Std nTPM: 3.4
Median nTPM: 21.0
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 31.9
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 31.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 30.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 30.3
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 30.0
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 29.6
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 28.6
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 28.5
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 28.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 28.1
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 27.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 67.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 67.2
FF:10169-103B7 60 years, female 85.1
FF:10153-102I9 76 years, female 49.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 45.2
Pig sample Sample description nTPM
Subiculum
nTPM: 44.5
Samples: 4

Max nTPM: 52.6
Min nTPM: 39.8
Sample A Female 52.6
Sample B Female 42.5
Sample C Male 43.1
Sample D Male 39.8
Dorsal hippocampus
nTPM: 43.4
Samples: 4

Max nTPM: 47.5
Min nTPM: 35.6
Sample A Female 47.5
Sample B Female 45.9
Sample C Male 44.6
Sample D Male 35.6
Entorhinal cortex
nTPM: 45.2
Samples: 4

Max nTPM: 49.1
Min nTPM: 37.4
Sample A Female 49.1
Sample B Female 45.4
Sample C Male 49.0
Sample D Male 37.4
Ventral hippocampus
nTPM: 42.1
Samples: 4

Max nTPM: 44.8
Min nTPM: 36.8
Sample A Female 42.6
Sample B Female 36.8
Sample C Male 44.8
Sample D Male 44.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 38.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 38.3
Samples: 4

Max nTPM: 41.9
Min nTPM: 36.3
Sample A Male 37.3
Sample B Male 37.7
Sample C Female 36.3
Sample D Female 41.9
Hippocampal formation
nTPM: 37.8
Samples: 4

Max nTPM: 41.2
Min nTPM: 35.0
Sample A Male 36.6
Sample B Male 38.5
Sample C Female 41.2
Sample D Female 35.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.5
68151347 Antisense, RP_041116_01_A05, Mouse strain C57BL/6J (56 days, male) 6.4
75986068 Antisense, RP_060606_02_D03, Mouse strain C57BL/6J (56 days, male) 0.7

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