HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:105.3 nTPM
HPA Brain:161.3 nTPM
GTEx:105.3 nTPM
FANTOM5:41.6 Scaled Tags Per Million
Pig:76.9 nTPM
Mouse:147.6 nTPM
Allen mouse:6.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA054551Antibody HPA057800Antibody CAB004993
Glial cells Not detectedNot detectedLow
Neuronal cells HighMediumMedium






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 161.3
Sample id Sample description nTPM
Hippocampus
nTPM: 130.5
1898 Male, age 80, left hemisphere 148.9
2621 Female, age 67, right hemisphere 148.4
2529 Female, age 94, left hemisphere 138.6
1855 Male, age 76, left hemisphere 128.9
2148 Female, age 91, left hemisphere 116.7
1911 Female, age 85, right hemisphere 101.3
Dentate gyrus
nTPM: 133.8
2530 Female, age 94, left hemisphere 177.3
2531 Female, age 67, both hemispheres 135.6
2010 Male, age 76, both hemispheres 130.9
2246 Female, age 85, both hemispheres 127.1
1927 Female, age 91, both hemispheres 123.9
2528 Male, age 74, both hemispheres 107.6
Entorhinal gyrus
nTPM: 137.8
2764 Male, age 80, right hemisphere 155.3
1938 Female, age 85, left hemisphere 142.7
2613 Female, age 94, left hemisphere 139.5
2686 Male, age 75, right hemisphere 139.5
1787 Male, age 76, left hemisphere 131.5
2117 Female, age 91, right hemisphere 118.2
Hippocampus, CA1
nTPM: 132.3
2749 Male, age 80, left hemisphere 176.7
1873 Female, age 85, both hemispheres 128.4
2527 Male, age 74, both hemispheres 128.4
2045 Male, age 76, both hemispheres 120.9
2082 Female, age 91, right hemisphere 107.2
Hippocampus, CA2
nTPM: 129.6
2437 Female, age 94, left hemisphere 145.7
1963 Male, age 80, left hemisphere 145.1
1892 Male, age 76, both hemispheres 142.0
1940 Female, age 85, left hemisphere 127.1
2249 Male, age 74, both hemispheres 112.7
2113 Female, age 91, right hemisphere 105.1
Hippocampus, CA3
nTPM: 130.5
2861 Female, age 67, both hemispheres 170.9
2620 Female, age 94, left hemisphere 136.5
2137 Male, age 80, left hemisphere 130.0
1867 Male, age 76, both hemispheres 127.2
1891 Female, age 85, both hemispheres 110.0
2436 Male, age 74, both hemispheres 108.6
Parahippocampal cortex
nTPM: 139.0
1850 Male, age 80, both hemispheres 161.7
2245 Female, age 91, both hemispheres 158.6
2532 Female, age 72, left hemisphere 151.9
2622 Female, age 67, right hemisphere 145.7
1933 Female, age 85, both hemispheres 135.8
2250 Female, age 67, right hemisphere 135.2
1990 Female, age 91, right hemisphere 129.7
2693 Female, age 94, both hemispheres 126.3
2692 Male, age 74, both hemispheres 124.8
2018 Male, age 76, both hemispheres 120.0
Perirhinal gyrus
nTPM: 161.3
1794 Male, age 80, right hemisphere 181.1
1841 Female, age 85, right hemisphere 168.3
1847 Female, age 91, left hemisphere 165.1
2521 Female, age 94, right hemisphere 147.2
2848 Male, age 76, right hemisphere 144.7
Subiculum
nTPM: 121.1
2438 Female, age 94, left hemisphere 139.7
1977 Female, age 85, both hemispheres 131.9
1901 Male, age 80, both hemispheres 127.4
2619 Male, age 74, both hemispheres 118.2
2042 Male, age 76, both hemispheres 109.8
2729 Female, age 91, right hemisphere 99.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 105.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 105.3
Samples: 197

Max nTPM: 268.6
Min nTPM: 38.4
Std nTPM: 32.1
Median nTPM: 98.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 268.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 237.3
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 190.7
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 188.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 183.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 179.8
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 177.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 176.7
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 175.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 169.2
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 162.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 41.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 41.6
FF:10153-102I9 76 years, female 54.1
FF:10169-103B7 60 years, female 29.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 76.9
Pig sample Sample description nTPM
Subiculum
nTPM: 64.9
Samples: 4

Max nTPM: 88.1
Min nTPM: 54.5
Sample A Female 88.1
Sample B Female 58.5
Sample C Male 58.3
Sample D Male 54.5
Dorsal hippocampus
nTPM: 61.5
Samples: 4

Max nTPM: 72.8
Min nTPM: 44.7
Sample A Female 72.8
Sample B Female 59.9
Sample C Male 68.5
Sample D Male 44.7
Entorhinal cortex
nTPM: 77.0
Samples: 4

Max nTPM: 90.8
Min nTPM: 59.7
Sample A Female 76.8
Sample B Female 90.8
Sample C Male 80.5
Sample D Male 59.7
Ventral hippocampus
nTPM: 62.8
Samples: 4

Max nTPM: 79.9
Min nTPM: 46.6
Sample A Female 59.7
Sample B Female 46.6
Sample C Male 79.9
Sample D Male 65.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 147.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 147.6
Samples: 4

Max nTPM: 157.2
Min nTPM: 136.7
Sample A Male 157.2
Sample B Male 153.2
Sample C Female 136.7
Sample D Female 143.4
Hippocampal formation
nTPM: 146.3
Samples: 4

Max nTPM: 158.1
Min nTPM: 131.8
Sample A Male 131.8
Sample B Male 157.2
Sample C Female 158.1
Sample D Female 137.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.1
69028246 Antisense, RP_050315_01_G07, Mouse strain C57BL/6J (56 days, male) 6.1

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