HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:81.5 nTPM
HPA Brain:131.9 nTPM
GTEx:81.5 nTPM
FANTOM5:80.1 Scaled Tags Per Million
Pig:31.4 nTPM
Mouse:16.7 nTPM
Allen mouse:4.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 131.9
Sample id Sample description nTPM
Hippocampus
nTPM: 131.9
2621 Female, age 67, right hemisphere 184.5
2529 Female, age 94, left hemisphere 142.8
1911 Female, age 85, right hemisphere 131.6
2148 Female, age 91, left hemisphere 119.2
1855 Male, age 76, left hemisphere 107.6
1898 Male, age 80, left hemisphere 105.9
Dentate gyrus
nTPM: 108.6
2531 Female, age 67, both hemispheres 134.3
1927 Female, age 91, both hemispheres 133.7
2530 Female, age 94, left hemisphere 108.6
2010 Male, age 76, both hemispheres 99.1
2528 Male, age 74, both hemispheres 95.2
2246 Female, age 85, both hemispheres 80.7
Entorhinal gyrus
nTPM: 96.8
2613 Female, age 94, left hemisphere 114.9
1787 Male, age 76, left hemisphere 105.8
2686 Male, age 75, right hemisphere 96.9
2117 Female, age 91, right hemisphere 89.6
2764 Male, age 80, right hemisphere 87.9
1938 Female, age 85, left hemisphere 85.5
Hippocampus, CA1
nTPM: 120.8
2749 Male, age 80, left hemisphere 170.0
2527 Male, age 74, both hemispheres 141.4
2082 Female, age 91, right hemisphere 111.8
1873 Female, age 85, both hemispheres 97.3
2045 Male, age 76, both hemispheres 83.6
Hippocampus, CA2
nTPM: 119.1
1963 Male, age 80, left hemisphere 205.2
2113 Female, age 91, right hemisphere 114.0
2437 Female, age 94, left hemisphere 105.8
2249 Male, age 74, both hemispheres 105.4
1892 Male, age 76, both hemispheres 101.6
1940 Female, age 85, left hemisphere 82.6
Hippocampus, CA3
nTPM: 123.8
2137 Male, age 80, left hemisphere 181.3
2861 Female, age 67, both hemispheres 167.5
2620 Female, age 94, left hemisphere 112.8
1867 Male, age 76, both hemispheres 103.1
2436 Male, age 74, both hemispheres 99.4
1891 Female, age 85, both hemispheres 78.7
Parahippocampal cortex
nTPM: 96.1
2245 Female, age 91, both hemispheres 136.8
2018 Male, age 76, both hemispheres 123.1
2622 Female, age 67, right hemisphere 117.2
2250 Female, age 67, right hemisphere 104.0
2693 Female, age 94, both hemispheres 88.3
1933 Female, age 85, both hemispheres 81.6
1990 Female, age 91, right hemisphere 81.4
1850 Male, age 80, both hemispheres 78.1
2692 Male, age 74, both hemispheres 77.8
2532 Female, age 72, left hemisphere 73.1
Perirhinal gyrus
nTPM: 94.3
1847 Female, age 91, left hemisphere 112.2
2521 Female, age 94, right hemisphere 98.0
1794 Male, age 80, right hemisphere 92.8
2848 Male, age 76, right hemisphere 87.1
1841 Female, age 85, right hemisphere 81.4
Subiculum
nTPM: 88.5
2042 Male, age 76, both hemispheres 99.9
1901 Male, age 80, both hemispheres 97.2
2619 Male, age 74, both hemispheres 93.5
2729 Female, age 91, right hemisphere 91.2
1977 Female, age 85, both hemispheres 78.5
2438 Female, age 94, left hemisphere 70.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 81.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 81.5
Samples: 197

Max nTPM: 392.0
Min nTPM: 9.4
Std nTPM: 52.7
Median nTPM: 68.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 392.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 264.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 261.5
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 216.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 208.0
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 207.6
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 198.4
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 197.8
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 194.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 192.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 186.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 80.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 80.1
FF:10169-103B7 60 years, female 89.3
FF:10153-102I9 76 years, female 70.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 31.4
Pig sample Sample description nTPM
Subiculum
nTPM: 24.4
Samples: 4

Max nTPM: 32.5
Min nTPM: 18.9
Sample A Female 32.5
Sample B Female 20.4
Sample C Male 25.8
Sample D Male 18.9
Dorsal hippocampus
nTPM: 29.2
Samples: 4

Max nTPM: 33.1
Min nTPM: 25.3
Sample A Female 33.1
Sample B Female 29.3
Sample C Male 29.0
Sample D Male 25.3
Entorhinal cortex
nTPM: 31.4
Samples: 4

Max nTPM: 37.4
Min nTPM: 27.6
Sample A Female 32.7
Sample B Female 27.6
Sample C Male 37.4
Sample D Male 27.7
Ventral hippocampus
nTPM: 27.1
Samples: 4

Max nTPM: 33.8
Min nTPM: 19.8
Sample A Female 22.1
Sample B Female 19.8
Sample C Male 33.8
Sample D Male 32.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 16.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.7
Samples: 4

Max nTPM: 18.2
Min nTPM: 14.3
Sample A Male 18.2
Sample B Male 18.0
Sample C Female 14.3
Sample D Female 16.4
Hippocampal formation
nTPM: 15.0
Samples: 4

Max nTPM: 18.3
Min nTPM: 11.2
Sample A Male 11.2
Sample B Male 18.3
Sample C Female 14.6
Sample D Female 16.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.3
71022633 Antisense, RP_050713_04_H03, Mouse strain C57BL/6J (56 days, male) 4.3

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