HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:10.9 nTPM
HPA Brain:74.4 nTPM
GTEx:10.9 nTPM
FANTOM5:31.6 Scaled Tags Per Million
Pig:11.5 nTPM
Mouse:13.6 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA057595
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 74.4
Sample id Sample description nTPM
Hippocampus
nTPM: 67.2
2148 Female, age 91, left hemisphere 76.2
2621 Female, age 67, right hemisphere 73.4
1911 Female, age 85, right hemisphere 70.5
1855 Male, age 76, left hemisphere 68.1
2529 Female, age 94, left hemisphere 60.3
1898 Male, age 80, left hemisphere 54.4
Dentate gyrus
nTPM: 70.2
2531 Female, age 67, both hemispheres 87.7
2246 Female, age 85, both hemispheres 75.4
1927 Female, age 91, both hemispheres 71.2
2528 Male, age 74, both hemispheres 70.9
2010 Male, age 76, both hemispheres 60.0
2530 Female, age 94, left hemisphere 56.2
Entorhinal gyrus
nTPM: 69.0
2613 Female, age 94, left hemisphere 80.5
2686 Male, age 75, right hemisphere 73.9
1938 Female, age 85, left hemisphere 68.8
2764 Male, age 80, right hemisphere 67.1
1787 Male, age 76, left hemisphere 62.5
2117 Female, age 91, right hemisphere 61.2
Hippocampus, CA1
nTPM: 70.6
2082 Female, age 91, right hemisphere 76.2
2045 Male, age 76, both hemispheres 73.8
1873 Female, age 85, both hemispheres 70.5
2527 Male, age 74, both hemispheres 68.0
2749 Male, age 80, left hemisphere 64.7
Hippocampus, CA2
nTPM: 65.1
2113 Female, age 91, right hemisphere 75.0
1940 Female, age 85, left hemisphere 70.7
2249 Male, age 74, both hemispheres 65.9
1963 Male, age 80, left hemisphere 61.0
2437 Female, age 94, left hemisphere 59.9
1892 Male, age 76, both hemispheres 58.4
Hippocampus, CA3
nTPM: 74.0
2620 Female, age 94, left hemisphere 88.8
2861 Female, age 67, both hemispheres 86.6
2137 Male, age 80, left hemisphere 74.1
1891 Female, age 85, both hemispheres 69.8
2436 Male, age 74, both hemispheres 68.9
1867 Male, age 76, both hemispheres 55.6
Parahippocampal cortex
nTPM: 74.4
2622 Female, age 67, right hemisphere 91.7
2693 Female, age 94, both hemispheres 88.1
2532 Female, age 72, left hemisphere 79.1
2692 Male, age 74, both hemispheres 75.7
2245 Female, age 91, both hemispheres 71.8
2250 Female, age 67, right hemisphere 70.2
1933 Female, age 85, both hemispheres 69.0
1850 Male, age 80, both hemispheres 67.9
1990 Female, age 91, right hemisphere 67.0
2018 Male, age 76, both hemispheres 63.7
Perirhinal gyrus
nTPM: 69.6
2848 Male, age 76, right hemisphere 79.0
1841 Female, age 85, right hemisphere 73.2
2521 Female, age 94, right hemisphere 70.1
1847 Female, age 91, left hemisphere 62.8
1794 Male, age 80, right hemisphere 62.7
Subiculum
nTPM: 66.4
2729 Female, age 91, right hemisphere 74.1
2619 Male, age 74, both hemispheres 70.6
1977 Female, age 85, both hemispheres 65.7
2438 Female, age 94, left hemisphere 63.9
1901 Male, age 80, both hemispheres 63.6
2042 Male, age 76, both hemispheres 60.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.9
Samples: 197

Max nTPM: 16.9
Min nTPM: 6.1
Std nTPM: 2.0
Median nTPM: 10.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 16.9
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 16.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 15.4
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 15.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 15.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 15.0
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 14.6
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 14.5
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 14.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 14.3
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 14.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 31.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.6
FF:10169-103B7 60 years, female 38.4
FF:10153-102I9 76 years, female 24.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.5
Pig sample Sample description nTPM
Subiculum
nTPM: 9.8
Samples: 4

Max nTPM: 12.9
Min nTPM: 7.7
Sample A Female 12.9
Sample B Female 9.6
Sample C Male 8.9
Sample D Male 7.7
Dorsal hippocampus
nTPM: 9.4
Samples: 4

Max nTPM: 10.6
Min nTPM: 8.7
Sample A Female 10.6
Sample B Female 8.7
Sample C Male 9.2
Sample D Male 9.1
Entorhinal cortex
nTPM: 11.6
Samples: 4

Max nTPM: 14.1
Min nTPM: 9.9
Sample A Female 9.9
Sample B Female 10.7
Sample C Male 14.1
Sample D Male 11.5
Ventral hippocampus
nTPM: 9.2
Samples: 4

Max nTPM: 10.2
Min nTPM: 7.9
Sample A Female 9.6
Sample B Female 7.9
Sample C Male 10.2
Sample D Male 9.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 13.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.4
Samples: 4

Max nTPM: 14.4
Min nTPM: 12.5
Sample A Male 13.0
Sample B Male 13.6
Sample C Female 14.4
Sample D Female 12.5
Hippocampal formation
nTPM: 13.7
Samples: 4

Max nTPM: 14.4
Min nTPM: 12.9
Sample A Male 14.4
Sample B Male 12.9
Sample C Female 14.3
Sample D Female 13.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
69012867 Antisense, RP_050309_01_F11, Mouse strain C57BL/6J (56 days, male) 0.0

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