HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:18.1 nTPM
HPA Brain:21.4 nTPM
GTEx:18.1 nTPM
FANTOM5:27.4 Scaled Tags Per Million
Pig:31.5 nTPM
Mouse:11.1 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA011912
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.4
Sample id Sample description nTPM
Hippocampus
nTPM: 21.4
2529 Female, age 94, left hemisphere 27.2
1911 Female, age 85, right hemisphere 22.5
2148 Female, age 91, left hemisphere 22.5
1898 Male, age 80, left hemisphere 22.0
1855 Male, age 76, left hemisphere 18.5
2621 Female, age 67, right hemisphere 15.7
Dentate gyrus
nTPM: 20.7
2528 Male, age 74, both hemispheres 35.4
2246 Female, age 85, both hemispheres 22.7
2530 Female, age 94, left hemisphere 18.9
2010 Male, age 76, both hemispheres 18.6
1927 Female, age 91, both hemispheres 16.3
2531 Female, age 67, both hemispheres 12.3
Entorhinal gyrus
nTPM: 12.8
2117 Female, age 91, right hemisphere 21.8
1787 Male, age 76, left hemisphere 13.8
1938 Female, age 85, left hemisphere 13.3
2686 Male, age 75, right hemisphere 11.3
2764 Male, age 80, right hemisphere 9.7
2613 Female, age 94, left hemisphere 6.9
Hippocampus, CA1
nTPM: 19.0
2527 Male, age 74, both hemispheres 25.9
2082 Female, age 91, right hemisphere 21.2
1873 Female, age 85, both hemispheres 20.9
2045 Male, age 76, both hemispheres 13.6
2749 Male, age 80, left hemisphere 13.5
Hippocampus, CA2
nTPM: 19.3
2249 Male, age 74, both hemispheres 34.0
1940 Female, age 85, left hemisphere 19.6
2113 Female, age 91, right hemisphere 18.9
1963 Male, age 80, left hemisphere 17.8
2437 Female, age 94, left hemisphere 16.6
1892 Male, age 76, both hemispheres 8.9
Hippocampus, CA3
nTPM: 21.0
2436 Male, age 74, both hemispheres 35.1
1891 Female, age 85, both hemispheres 20.8
2620 Female, age 94, left hemisphere 20.4
2137 Male, age 80, left hemisphere 19.6
2861 Female, age 67, both hemispheres 15.9
1867 Male, age 76, both hemispheres 14.4
Parahippocampal cortex
nTPM: 12.4
2018 Male, age 76, both hemispheres 15.9
2250 Female, age 67, right hemisphere 15.7
2245 Female, age 91, both hemispheres 13.7
1990 Female, age 91, right hemisphere 13.2
2692 Male, age 74, both hemispheres 12.7
2532 Female, age 72, left hemisphere 11.3
1933 Female, age 85, both hemispheres 10.8
1850 Male, age 80, both hemispheres 10.7
2622 Female, age 67, right hemisphere 10.3
2693 Female, age 94, both hemispheres 9.2
Perirhinal gyrus
nTPM: 10.5
2521 Female, age 94, right hemisphere 12.0
1794 Male, age 80, right hemisphere 11.5
1847 Female, age 91, left hemisphere 10.4
1841 Female, age 85, right hemisphere 9.4
2848 Male, age 76, right hemisphere 9.4
Subiculum
nTPM: 19.0
2729 Female, age 91, right hemisphere 25.2
2619 Male, age 74, both hemispheres 22.2
1901 Male, age 80, both hemispheres 17.9
2438 Female, age 94, left hemisphere 17.2
1977 Female, age 85, both hemispheres 16.1
2042 Male, age 76, both hemispheres 15.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.1
Samples: 197

Max nTPM: 117.2
Min nTPM: 4.0
Std nTPM: 15.5
Median nTPM: 14.1
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 117.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 97.1
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 88.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 74.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 70.0
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 63.8
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 59.5
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 57.8
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 49.2
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 49.0
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 46.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.4
FF:10169-103B7 60 years, female 42.5
FF:10153-102I9 76 years, female 12.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 31.5
Pig sample Sample description nTPM
Subiculum
nTPM: 25.8
Samples: 4

Max nTPM: 31.2
Min nTPM: 22.1
Sample A Female 22.1
Sample B Female 31.2
Sample C Male 26.3
Sample D Male 23.5
Dorsal hippocampus
nTPM: 28.1
Samples: 4

Max nTPM: 35.1
Min nTPM: 19.4
Sample A Female 31.0
Sample B Female 26.7
Sample C Male 35.1
Sample D Male 19.4
Entorhinal cortex
nTPM: 16.1
Samples: 4

Max nTPM: 20.2
Min nTPM: 12.6
Sample A Female 14.4
Sample B Female 17.1
Sample C Male 20.2
Sample D Male 12.6
Ventral hippocampus
nTPM: 31.6
Samples: 4

Max nTPM: 41.8
Min nTPM: 24.7
Sample A Female 32.9
Sample B Female 24.7
Sample C Male 41.8
Sample D Male 26.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 11.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.3
Samples: 4

Max nTPM: 12.1
Min nTPM: 7.9
Sample A Male 9.9
Sample B Male 11.3
Sample C Female 12.1
Sample D Female 7.9
Hippocampal formation
nTPM: 11.1
Samples: 4

Max nTPM: 12.3
Min nTPM: 9.4
Sample A Male 12.0
Sample B Male 9.4
Sample C Female 10.8
Sample D Female 12.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
68545735 Antisense, RP_050120_01_E01, Mouse strain C57BL/6J (56 days, male) 0.4

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