HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:20.0 nTPM
HPA Brain:51.2 nTPM
GTEx:20.0 nTPM
FANTOM5:51.6 Scaled Tags Per Million
Pig:19.3 nTPM
Mouse:20.1 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008718
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 51.2
Sample id Sample description nTPM
Hippocampus
nTPM: 47.6
2529 Female, age 94, left hemisphere 52.7
2621 Female, age 67, right hemisphere 49.5
1911 Female, age 85, right hemisphere 49.4
2148 Female, age 91, left hemisphere 46.1
1898 Male, age 80, left hemisphere 44.4
1855 Male, age 76, left hemisphere 43.5
Dentate gyrus
nTPM: 46.6
2530 Female, age 94, left hemisphere 48.6
2010 Male, age 76, both hemispheres 47.4
2531 Female, age 67, both hemispheres 47.3
2528 Male, age 74, both hemispheres 46.5
2246 Female, age 85, both hemispheres 46.1
1927 Female, age 91, both hemispheres 43.6
Entorhinal gyrus
nTPM: 48.3
2117 Female, age 91, right hemisphere 54.0
2686 Male, age 75, right hemisphere 51.6
1938 Female, age 85, left hemisphere 47.4
2764 Male, age 80, right hemisphere 47.3
1787 Male, age 76, left hemisphere 45.9
2613 Female, age 94, left hemisphere 43.3
Hippocampus, CA1
nTPM: 46.4
2527 Male, age 74, both hemispheres 48.0
2045 Male, age 76, both hemispheres 47.1
1873 Female, age 85, both hemispheres 46.5
2749 Male, age 80, left hemisphere 46.4
2082 Female, age 91, right hemisphere 43.8
Hippocampus, CA2
nTPM: 48.0
2437 Female, age 94, left hemisphere 51.7
1963 Male, age 80, left hemisphere 49.9
1940 Female, age 85, left hemisphere 48.4
1892 Male, age 76, both hemispheres 47.2
2113 Female, age 91, right hemisphere 45.4
2249 Male, age 74, both hemispheres 45.3
Hippocampus, CA3
nTPM: 47.9
1867 Male, age 76, both hemispheres 53.2
1891 Female, age 85, both hemispheres 52.1
2137 Male, age 80, left hemisphere 49.4
2861 Female, age 67, both hemispheres 49.2
2436 Male, age 74, both hemispheres 45.9
2620 Female, age 94, left hemisphere 37.7
Parahippocampal cortex
nTPM: 49.2
2532 Female, age 72, left hemisphere 54.4
1850 Male, age 80, both hemispheres 53.3
2622 Female, age 67, right hemisphere 51.2
2018 Male, age 76, both hemispheres 50.4
1990 Female, age 91, right hemisphere 49.3
2692 Male, age 74, both hemispheres 48.5
1933 Female, age 85, both hemispheres 47.6
2245 Female, age 91, both hemispheres 46.6
2250 Female, age 67, right hemisphere 45.3
2693 Female, age 94, both hemispheres 45.3
Perirhinal gyrus
nTPM: 46.6
1841 Female, age 85, right hemisphere 51.0
2521 Female, age 94, right hemisphere 47.6
2848 Male, age 76, right hemisphere 46.7
1794 Male, age 80, right hemisphere 45.3
1847 Female, age 91, left hemisphere 42.5
Subiculum
nTPM: 51.2
2438 Female, age 94, left hemisphere 59.0
2042 Male, age 76, both hemispheres 52.1
1901 Male, age 80, both hemispheres 51.8
2619 Male, age 74, both hemispheres 49.1
2729 Female, age 91, right hemisphere 48.1
1977 Female, age 85, both hemispheres 46.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.0
Samples: 197

Max nTPM: 44.3
Min nTPM: 9.9
Std nTPM: 5.2
Median nTPM: 19.3
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 44.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 41.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 37.2
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 31.8
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 31.1
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 30.9
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 30.8
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 30.8
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 30.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 30.0
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 29.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 51.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 51.6
FF:10153-102I9 76 years, female 57.5
FF:10169-103B7 60 years, female 45.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.3
Pig sample Sample description nTPM
Subiculum
nTPM: 19.2
Samples: 4

Max nTPM: 19.7
Min nTPM: 18.4
Sample A Female 18.4
Sample B Female 19.7
Sample C Male 19.2
Sample D Male 19.5
Dorsal hippocampus
nTPM: 19.3
Samples: 4

Max nTPM: 22.7
Min nTPM: 17.9
Sample A Female 18.4
Sample B Female 17.9
Sample C Male 22.7
Sample D Male 18.3
Entorhinal cortex
nTPM: 19.1
Samples: 4

Max nTPM: 19.7
Min nTPM: 18.6
Sample A Female 19.3
Sample B Female 19.7
Sample C Male 18.6
Sample D Male 18.8
Ventral hippocampus
nTPM: 18.5
Samples: 4

Max nTPM: 19.3
Min nTPM: 18.0
Sample A Female 18.5
Sample B Female 18.0
Sample C Male 19.3
Sample D Male 18.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 20.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.1
Samples: 4

Max nTPM: 22.6
Min nTPM: 18.8
Sample A Male 19.5
Sample B Male 18.8
Sample C Female 22.6
Sample D Female 19.6
Hippocampal formation
nTPM: 17.6
Samples: 4

Max nTPM: 20.2
Min nTPM: 14.5
Sample A Male 14.5
Sample B Male 20.2
Sample C Female 18.3
Sample D Female 17.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
74265352 Antisense, RP_051219_03_E07, Mouse strain C57BL/6J (56 days, male) 0.1

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