HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:79.1 nTPM
HPA Brain:152.7 nTPM
GTEx:79.1 nTPM
FANTOM5:394.5 Scaled Tags Per Million
Pig:442.5 nTPM
Mouse:671.9 nTPM
Allen mouse:23.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA009682
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 152.7
Sample id Sample description nTPM
Hippocampus
nTPM: 99.0
1898 Male, age 80, left hemisphere 160.7
1855 Male, age 76, left hemisphere 97.3
2621 Female, age 67, right hemisphere 92.5
1911 Female, age 85, right hemisphere 87.1
2148 Female, age 91, left hemisphere 80.3
2529 Female, age 94, left hemisphere 75.7
Dentate gyrus
nTPM: 101.4
1927 Female, age 91, both hemispheres 145.2
2010 Male, age 76, both hemispheres 112.2
2528 Male, age 74, both hemispheres 102.5
2246 Female, age 85, both hemispheres 92.2
2530 Female, age 94, left hemisphere 88.5
2531 Female, age 67, both hemispheres 68.0
Entorhinal gyrus
nTPM: 112.6
1938 Female, age 85, left hemisphere 145.3
2764 Male, age 80, right hemisphere 124.8
2613 Female, age 94, left hemisphere 123.9
1787 Male, age 76, left hemisphere 115.9
2117 Female, age 91, right hemisphere 92.0
2686 Male, age 75, right hemisphere 73.8
Hippocampus, CA1
nTPM: 123.0
2749 Male, age 80, left hemisphere 203.9
1873 Female, age 85, both hemispheres 122.4
2045 Male, age 76, both hemispheres 100.3
2527 Male, age 74, both hemispheres 99.2
2082 Female, age 91, right hemisphere 89.0
Hippocampus, CA2
nTPM: 113.6
1892 Male, age 76, both hemispheres 155.5
1963 Male, age 80, left hemisphere 136.4
2249 Male, age 74, both hemispheres 109.4
1940 Female, age 85, left hemisphere 102.2
2437 Female, age 94, left hemisphere 90.0
2113 Female, age 91, right hemisphere 88.2
Hippocampus, CA3
nTPM: 107.4
2137 Male, age 80, left hemisphere 158.1
1867 Male, age 76, both hemispheres 120.5
2436 Male, age 74, both hemispheres 115.1
1891 Female, age 85, both hemispheres 99.6
2620 Female, age 94, left hemisphere 82.5
2861 Female, age 67, both hemispheres 68.3
Parahippocampal cortex
nTPM: 114.3
1850 Male, age 80, both hemispheres 163.3
1990 Female, age 91, right hemisphere 144.6
1933 Female, age 85, both hemispheres 131.5
2250 Female, age 67, right hemisphere 126.4
2693 Female, age 94, both hemispheres 118.4
2245 Female, age 91, both hemispheres 110.3
2532 Female, age 72, left hemisphere 97.0
2018 Male, age 76, both hemispheres 95.0
2692 Male, age 74, both hemispheres 84.0
2622 Female, age 67, right hemisphere 72.9
Perirhinal gyrus
nTPM: 152.7
1847 Female, age 91, left hemisphere 195.1
1794 Male, age 80, right hemisphere 156.6
1841 Female, age 85, right hemisphere 155.2
2521 Female, age 94, right hemisphere 134.7
2848 Male, age 76, right hemisphere 121.8
Subiculum
nTPM: 94.1
1977 Female, age 85, both hemispheres 123.5
1901 Male, age 80, both hemispheres 120.5
2438 Female, age 94, left hemisphere 81.4
2729 Female, age 91, right hemisphere 81.1
2619 Male, age 74, both hemispheres 80.1
2042 Male, age 76, both hemispheres 78.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 79.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 79.1
Samples: 197

Max nTPM: 187.8
Min nTPM: 30.3
Std nTPM: 31.6
Median nTPM: 76.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 187.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 166.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 159.1
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 147.9
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 147.1
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 145.8
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 144.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 142.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 141.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 140.4
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 137.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 394.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 394.5
FF:10169-103B7 60 years, female 498.5
FF:10153-102I9 76 years, female 290.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 442.5
Pig sample Sample description nTPM
Subiculum
nTPM: 442.5
Samples: 4

Max nTPM: 574.9
Min nTPM: 385.5
Sample A Female 574.9
Sample B Female 416.1
Sample C Male 393.5
Sample D Male 385.5
Dorsal hippocampus
nTPM: 433.1
Samples: 4

Max nTPM: 533.1
Min nTPM: 323.3
Sample A Female 533.1
Sample B Female 481.9
Sample C Male 394.1
Sample D Male 323.3
Entorhinal cortex
nTPM: 422.7
Samples: 4

Max nTPM: 478.0
Min nTPM: 352.6
Sample A Female 433.7
Sample B Female 478.0
Sample C Male 426.4
Sample D Male 352.6
Ventral hippocampus
nTPM: 401.7
Samples: 4

Max nTPM: 462.8
Min nTPM: 297.5
Sample A Female 446.1
Sample B Female 297.5
Sample C Male 462.8
Sample D Male 400.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 671.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 672.0
Samples: 4

Max nTPM: 731.5
Min nTPM: 620.6
Sample A Male 620.6
Sample B Male 731.5
Sample C Female 664.7
Sample D Female 671.0
Hippocampal formation
nTPM: 619.0
Samples: 4

Max nTPM: 717.5
Min nTPM: 567.1
Sample A Male 717.5
Sample B Male 591.4
Sample C Female 600.0
Sample D Female 567.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 23.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 23.5
72715 Antisense, RP_040407_01_H06, Mouse strain C57BL/6J (56 days, male) 23.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org