HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:30.8 nTPM
HPA Brain:14.5 nTPM
GTEx:30.8 nTPM
FANTOM5:40.4 Scaled Tags Per Million
Pig:23.3 nTPM
Mouse:76.7 nTPM
Allen mouse:12.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA010025
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.5
Sample id Sample description nTPM
Hippocampus
nTPM: 14.3
2529 Female, age 94, left hemisphere 17.1
1898 Male, age 80, left hemisphere 16.8
1855 Male, age 76, left hemisphere 14.0
2621 Female, age 67, right hemisphere 13.5
1911 Female, age 85, right hemisphere 12.3
2148 Female, age 91, left hemisphere 12.3
Dentate gyrus
nTPM: 13.1
2530 Female, age 94, left hemisphere 16.3
2528 Male, age 74, both hemispheres 14.5
2010 Male, age 76, both hemispheres 13.2
2246 Female, age 85, both hemispheres 12.0
2531 Female, age 67, both hemispheres 11.6
1927 Female, age 91, both hemispheres 10.7
Entorhinal gyrus
nTPM: 12.6
2117 Female, age 91, right hemisphere 18.0
1787 Male, age 76, left hemisphere 13.2
1938 Female, age 85, left hemisphere 12.9
2764 Male, age 80, right hemisphere 12.1
2686 Male, age 75, right hemisphere 10.5
2613 Female, age 94, left hemisphere 8.7
Hippocampus, CA1
nTPM: 13.7
2527 Male, age 74, both hemispheres 16.9
2749 Male, age 80, left hemisphere 14.2
1873 Female, age 85, both hemispheres 13.8
2045 Male, age 76, both hemispheres 12.2
2082 Female, age 91, right hemisphere 11.4
Hippocampus, CA2
nTPM: 13.7
2249 Male, age 74, both hemispheres 16.0
1963 Male, age 80, left hemisphere 14.7
1940 Female, age 85, left hemisphere 14.3
1892 Male, age 76, both hemispheres 13.3
2113 Female, age 91, right hemisphere 12.3
2437 Female, age 94, left hemisphere 11.5
Hippocampus, CA3
nTPM: 13.5
2436 Male, age 74, both hemispheres 19.3
1891 Female, age 85, both hemispheres 15.1
2137 Male, age 80, left hemisphere 13.3
1867 Male, age 76, both hemispheres 13.1
2861 Female, age 67, both hemispheres 10.5
2620 Female, age 94, left hemisphere 9.7
Parahippocampal cortex
nTPM: 12.5
2018 Male, age 76, both hemispheres 14.1
2245 Female, age 91, both hemispheres 13.9
2250 Female, age 67, right hemisphere 13.8
1933 Female, age 85, both hemispheres 13.2
2532 Female, age 72, left hemisphere 12.7
2692 Male, age 74, both hemispheres 12.7
1990 Female, age 91, right hemisphere 12.2
1850 Male, age 80, both hemispheres 11.9
2622 Female, age 67, right hemisphere 11.3
2693 Female, age 94, both hemispheres 9.6
Perirhinal gyrus
nTPM: 11.2
1841 Female, age 85, right hemisphere 12.8
2521 Female, age 94, right hemisphere 11.4
1847 Female, age 91, left hemisphere 10.9
1794 Male, age 80, right hemisphere 10.5
2848 Male, age 76, right hemisphere 10.2
Subiculum
nTPM: 14.5
2042 Male, age 76, both hemispheres 16.7
2438 Female, age 94, left hemisphere 16.4
1977 Female, age 85, both hemispheres 14.5
1901 Male, age 80, both hemispheres 14.3
2729 Female, age 91, right hemisphere 13.1
2619 Male, age 74, both hemispheres 12.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 30.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.8
Samples: 197

Max nTPM: 95.9
Min nTPM: 15.2
Std nTPM: 8.7
Median nTPM: 29.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 95.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 58.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 55.2
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 51.3
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 48.7
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 48.6
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 46.0
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 45.4
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 44.2
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 43.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 43.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.4
FF:10169-103B7 60 years, female 41.5
FF:10153-102I9 76 years, female 39.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.3
Pig sample Sample description nTPM
Subiculum
nTPM: 20.2
Samples: 4

Max nTPM: 25.6
Min nTPM: 17.4
Sample A Female 25.6
Sample B Female 18.4
Sample C Male 17.4
Sample D Male 19.3
Dorsal hippocampus
nTPM: 23.3
Samples: 4

Max nTPM: 31.6
Min nTPM: 15.3
Sample A Female 31.6
Sample B Female 20.3
Sample C Male 26.1
Sample D Male 15.3
Entorhinal cortex
nTPM: 20.4
Samples: 4

Max nTPM: 24.2
Min nTPM: 18.5
Sample A Female 19.4
Sample B Female 24.2
Sample C Male 19.4
Sample D Male 18.5
Ventral hippocampus
nTPM: 20.0
Samples: 4

Max nTPM: 22.0
Min nTPM: 15.9
Sample A Female 21.8
Sample B Female 15.9
Sample C Male 22.0
Sample D Male 20.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 76.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 66.7
Samples: 4

Max nTPM: 68.5
Min nTPM: 65.2
Sample A Male 65.2
Sample B Male 66.2
Sample C Female 68.5
Sample D Female 67.0
Hippocampal formation
nTPM: 76.7
Samples: 4

Max nTPM: 84.9
Min nTPM: 72.2
Sample A Male 84.9
Sample B Male 72.2
Sample C Female 75.8
Sample D Female 73.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.1
69838758 Antisense, RP_050324_01_G11, Mouse strain C57BL/6J (56 days, male) 12.1

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