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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
331.4
nTPM
FANTOM5:
408.0
Scaled Tags Per Million
Pig:
129.2
nTPM
Allen mouse:
0.2
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
331.4
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 331.4
2301
Female, age 85, both hemispheres
473.9
2090
Male, age 80, both hemispheres
371.4
2188
Female, age 91, both hemispheres
294.6
1984
Male, age 76, both hemispheres
185.8
Dorsal cochlear nucleus nTPM: 240.3
2187
Female, age 91, both hemispheres
306.7
2378
Male, age 80, both hemispheres
244.1
2370
Male, age 61, both hemispheres
232.6
2802
Male, age 74, right hemisphere
224.6
2058
Male, age 76, both hemispheres
193.7
Dorsal tegmental nucleus nTPM: 207.9
2083
Male, age 80, both hemispheres
292.4
2326
Male, age 74, both hemispheres
219.7
1936
Male, age 76, left hemisphere
182.4
2358
Male, age 61, both hemispheres
137.1
Dorsolateral tegmental area nTPM: 243.4
2751
Female, age 85, both hemispheres
387.3
2337
Male, age 61, both hemispheres
330.9
2654
Male, age 80, both hemispheres
270.7
2360
Male, age 74, both hemispheres
136.0
2141
Male, age 76, both hemispheres
92.0
Kolliker-Fuse nucleus nTPM: 221.0
2793
Female, age 91, left hemisphere
309.9
2163
Male, age 80, both hemispheres
221.1
2315
Male, age 76, right hemisphere
131.9
Lateral lemniscal nuclei nTPM: 210.9
2320
Female, age 91, left hemisphere
277.7
2453
Male, age 74, right hemisphere
207.7
2746
Female, age 85, left hemisphere
203.6
2169
Male, age 76, both hemispheres
197.0
2036
Male, age 80, both hemispheres
168.7
Lateral parabrachial nucleus nTPM: 238.6
2792
Male, age 76, both hemispheres
315.7
2013
Male, age 80, both hemispheres
264.9
2790
Male, age 61, both hemispheres
243.6
2139
Female, age 85, right hemisphere
130.2
Lateral vestibular nucleus nTPM: 280.5
2311
Male, age 80, both hemispheres
337.1
2184
Male, age 76, both hemispheres
223.9
Locus coeruleus nTPM: 96.8
2162
Male, age 80, both hemispheres
134.9
2720
Male, age 74, both hemispheres
125.1
2123
Female, age 91, both hemispheres
103.3
2317
Female, age 72, unknown
101.6
2014
Male, age 55, unknown
81.3
2788
Male, age 74, unknown
73.0
1980
Male, age 76, both hemispheres
58.6
Medial parabrachial nucleus nTPM: 289.0
2170
Female, age 91, both hemispheres
369.2
2463
Female, age 85, right hemisphere
343.3
2854
Male, age 80, both hemispheres
274.6
2156
Male, age 61, both hemispheres
243.1
2786
Male, age 76, both hemispheres
214.7
Medial periolivary nuclei nTPM: 225.8
2458
Female, age 91, both hemispheres
285.8
2081
Male, age 80, both hemispheres
273.9
2791
Male, age 74, right hemisphere
228.8
2063
Male, age 76, both hemispheres
187.3
2171
Female, age 85, both hemispheres
153.3
Motor facial nucleus nTPM: 260.2
2126
Male, age 61, both hemispheres
515.8
2697
Female, age 85, both hemispheres
245.2
2365
Male, age 74, right hemisphere
231.6
2795
Female, age 91, both hemispheres
214.3
2327
Male, age 80, both hemispheres
180.5
2062
Male, age 76, both hemispheres
173.9
Motor trigeminal nucleus nTPM: 254.4
2321
Female, age 91, both hemispheres
318.0
2335
Male, age 61, both hemispheres
284.7
2560
Male, age 74, both hemispheres
276.4
2309
Male, age 76, both hemispheres
209.6
2079
Male, age 80, both hemispheres
183.1
Nuclei of the trapezoid body nTPM: 213.6
2166
Male, age 80, both hemispheres
276.5
2159
Male, age 61, both hemispheres
258.9
2368
Female, age 91, both hemispheres
232.1
1983
Male, age 76, both hemispheres
172.4
2735
Female, age 85, both hemispheres
128.1
Nucleus raphe magnus nTPM: 184.1
2459
Female, age 91, both hemispheres
245.2
2328
Male, age 80, both hemispheres
222.7
2051
Male, age 76, both hemispheres
209.9
2455
Male, age 74, both hemispheres
177.8
2160
Male, age 61, both hemispheres
136.0
2172
Female, age 85, both hemispheres
113.3
Paramedian reticular nucleus nTPM: 235.8
2057
Male, age 80, both hemispheres
273.5
2052
Male, age 76, both hemispheres
224.2
2050
Female, age 85, both hemispheres
223.7
2313
Male, age 61, both hemispheres
221.8
Pedunculopontine tegmental nucleus nTPM: 211.0
2338
Male, age 61, both hemispheres
250.9
2334
Male, age 80, both hemispheres
216.5
1921
Female, age 85, both hemispheres
165.6
Pontine nuclei nTPM: 256.6
2454
Male, age 74, left hemisphere
350.5
2319
Female, age 91, both hemispheres
306.4
2109
Female, age 72, unknown
299.5
1968
Male, age 76, left hemisphere
258.0
2115
Male, age 80, left hemisphere
244.5
1863
Male, age 55, unknown
219.1
2727
Male, age 61, right hemisphere
206.2
2787
Female, age 85, both hemispheres
168.3
Pontine raphe nucleus nTPM: 148.0
2122
Female, age 85, midline
158.6
2853
Male, age 76, midline
137.5
Posteroventral cochlear nucleus nTPM: 270.4
2341
Male, age 80, both hemispheres
336.2
2135
Female, age 91, both hemispheres
297.4
2371
Male, age 61, both hemispheres
291.4
2070
Male, age 76, both hemispheres
257.5
2752
Female, age 85, both hemispheres
169.5
Principal sensory trigeminal nucleus nTPM: 224.6
2367
Female, age 91, left hemisphere
298.0
2158
Male, age 61, both hemispheres
210.6
2324
Male, age 76, both hemispheres
207.1
2008
Male, age 80, left hemisphere
182.8
Reticular pontine nucleus, caudal nTPM: 264.1
2559
Male, age 74, both hemispheres
337.9
2457
Female, age 91, both hemispheres
302.8
2092
Male, age 76, both hemispheres
232.4
2332
Male, age 80, right hemisphere
183.4
Reticular pontine nucleus, oral nTPM: 274.9
2361
Male, age 74, both hemispheres
330.6
2366
Female, age 91, both hemispheres
280.8
1939
Male, age 80, both hemispheres
277.3
2167
Male, age 76, both hemispheres
243.3
2012
Female, age 85, both hemispheres
242.7
Reticulotegmental nucleus nTPM: 214.6
2322
Female, age 91, both hemispheres
277.2
2452
Male, age 74, both hemispheres
232.5
2333
Male, age 80, both hemispheres
219.5
2325
Male, age 76, both hemispheres
129.4
Spinal trigeminal nucleus, oral nTPM: 221.6
2164
Male, age 80, both hemispheres
291.5
1978
Male, age 76, both hemispheres
204.7
2737
Female, age 85, both hemispheres
168.7
Subcoeruleus area nTPM: 238.4
2369
Female, age 85, left hemisphere
426.2
2089
Male, age 76, left hemisphere
218.2
1958
Male, age 80, both hemispheres
215.3
2451
Male, age 74, both hemispheres
168.0
2323
Female, age 91, left hemisphere
164.1
Superior olive nTPM: 239.4
2329
Male, age 80, right hemisphere
282.6
2020
Male, age 76, both hemispheres
263.9
2561
Female, age 91, both hemispheres
237.8
2364
Male, age 74, right hemisphere
235.8
1875
Female, age 85, both hemispheres
176.9
Ventral periolivary nuclei nTPM: 193.2
2023
Male, age 76, both hemispheres
265.7
2165
Male, age 80, both hemispheres
209.3
2794
Female, age 91, left hemisphere
175.7
2130
Female, age 85, both hemispheres
122.0
Ventrolateral tegmental area, A5 NE cell group nTPM: 253.2
2359
Male, age 61, both hemispheres
312.7
2456
Female, age 91, both hemispheres
295.5
2840
Female, age 85, both hemispheres
245.3
2161
Male, age 80, both hemispheres
228.1
1959
Male, age 76, both hemispheres
227.6
2449
Male, age 74, both hemispheres
209.8
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
129.2
Pig sample
Sample description
nTPM
Pons nTPM: 129.2
Samples: 4
Max nTPM: 212.1
Min nTPM: 67.5
Sample A
Female
67.5
Sample B
Female
115.3
Sample C
Male
121.8
Sample D
Male
212.1
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
