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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
29.8
nTPM
FANTOM5:
9.9
Scaled Tags Per Million
Pig:
2.7
nTPM
PONS - HPA Brain RNA-seq
Max nTPM
29.8
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 13.5
2090
Male, age 80, both hemispheres
15.4
1984
Male, age 76, both hemispheres
14.4
2301
Female, age 85, both hemispheres
13.8
2188
Female, age 91, both hemispheres
10.3
Dorsal cochlear nucleus nTPM: 24.9
2802
Male, age 74, right hemisphere
31.7
2370
Male, age 61, both hemispheres
26.7
2058
Male, age 76, both hemispheres
26.4
2378
Male, age 80, both hemispheres
22.8
2187
Female, age 91, both hemispheres
17.0
Dorsal tegmental nucleus nTPM: 20.8
2083
Male, age 80, both hemispheres
23.9
1936
Male, age 76, left hemisphere
20.7
2326
Male, age 74, both hemispheres
19.5
2358
Male, age 61, both hemispheres
19.0
Dorsolateral tegmental area nTPM: 20.3
2141
Male, age 76, both hemispheres
29.2
2654
Male, age 80, both hemispheres
22.7
2751
Female, age 85, both hemispheres
19.3
2360
Male, age 74, both hemispheres
18.4
2337
Male, age 61, both hemispheres
12.0
Kolliker-Fuse nucleus nTPM: 14.7
2315
Male, age 76, right hemisphere
15.8
2163
Male, age 80, both hemispheres
15.7
2793
Female, age 91, left hemisphere
12.5
Lateral lemniscal nuclei nTPM: 13.6
2169
Male, age 76, both hemispheres
18.5
2453
Male, age 74, right hemisphere
15.3
2036
Male, age 80, both hemispheres
13.3
2320
Female, age 91, left hemisphere
12.0
2746
Female, age 85, left hemisphere
9.2
Lateral parabrachial nucleus nTPM: 15.0
2790
Male, age 61, both hemispheres
20.3
2139
Female, age 85, right hemisphere
16.1
2013
Male, age 80, both hemispheres
13.9
2792
Male, age 76, both hemispheres
9.6
Lateral vestibular nucleus nTPM: 20.0
2311
Male, age 80, both hemispheres
23.0
2184
Male, age 76, both hemispheres
17.0
Locus coeruleus nTPM: 27.9
1980
Male, age 76, both hemispheres
33.7
2317
Female, age 72, unknown
31.6
2014
Male, age 55, unknown
31.4
2162
Male, age 80, both hemispheres
26.5
2123
Female, age 91, both hemispheres
26.1
2720
Male, age 74, both hemispheres
23.5
2788
Male, age 74, unknown
22.5
Medial parabrachial nucleus nTPM: 19.9
2786
Male, age 76, both hemispheres
25.2
2170
Female, age 91, both hemispheres
21.2
2156
Male, age 61, both hemispheres
20.5
2463
Female, age 85, right hemisphere
18.0
2854
Male, age 80, both hemispheres
14.7
Medial periolivary nuclei nTPM: 12.8
2063
Male, age 76, both hemispheres
16.5
2791
Male, age 74, right hemisphere
13.2
2171
Female, age 85, both hemispheres
12.4
2458
Female, age 91, both hemispheres
11.2
2081
Male, age 80, both hemispheres
10.7
Motor facial nucleus nTPM: 15.7
2126
Male, age 61, both hemispheres
20.6
2795
Female, age 91, both hemispheres
20.6
2062
Male, age 76, both hemispheres
18.9
2327
Male, age 80, both hemispheres
12.8
2365
Male, age 74, right hemisphere
11.9
2697
Female, age 85, both hemispheres
9.7
Motor trigeminal nucleus nTPM: 16.1
2335
Male, age 61, both hemispheres
21.8
2309
Male, age 76, both hemispheres
18.4
2560
Male, age 74, both hemispheres
15.8
2321
Female, age 91, both hemispheres
13.2
2079
Male, age 80, both hemispheres
11.2
Nuclei of the trapezoid body nTPM: 14.9
1983
Male, age 76, both hemispheres
19.2
2368
Female, age 91, both hemispheres
16.8
2735
Female, age 85, both hemispheres
14.1
2166
Male, age 80, both hemispheres
12.4
2159
Male, age 61, both hemispheres
12.1
Nucleus raphe magnus nTPM: 13.3
2172
Female, age 85, both hemispheres
15.4
2051
Male, age 76, both hemispheres
14.1
2328
Male, age 80, both hemispheres
14.1
2160
Male, age 61, both hemispheres
12.9
2455
Male, age 74, both hemispheres
12.3
2459
Female, age 91, both hemispheres
11.2
Paramedian reticular nucleus nTPM: 19.3
2313
Male, age 61, both hemispheres
22.3
2050
Female, age 85, both hemispheres
19.9
2057
Male, age 80, both hemispheres
19.8
2052
Male, age 76, both hemispheres
15.1
Pedunculopontine tegmental nucleus nTPM: 22.3
1921
Female, age 85, both hemispheres
27.5
2334
Male, age 80, both hemispheres
22.1
2338
Male, age 61, both hemispheres
17.4
Pontine nuclei nTPM: 12.2
2787
Female, age 85, both hemispheres
15.2
1968
Male, age 76, left hemisphere
14.0
2109
Female, age 72, unknown
13.4
1863
Male, age 55, unknown
13.1
2115
Male, age 80, left hemisphere
11.6
2727
Male, age 61, right hemisphere
10.7
2454
Male, age 74, left hemisphere
10.0
2319
Female, age 91, both hemispheres
9.9
Pontine raphe nucleus nTPM: 29.8
2853
Male, age 76, midline
37.2
2122
Female, age 85, midline
22.3
Posteroventral cochlear nucleus nTPM: 16.4
2752
Female, age 85, both hemispheres
22.8
2371
Male, age 61, both hemispheres
22.1
2070
Male, age 76, both hemispheres
17.7
2341
Male, age 80, both hemispheres
11.3
2135
Female, age 91, both hemispheres
8.1
Principal sensory trigeminal nucleus nTPM: 13.3
2324
Male, age 76, both hemispheres
17.5
2158
Male, age 61, both hemispheres
13.5
2008
Male, age 80, left hemisphere
12.1
2367
Female, age 91, left hemisphere
10.1
Reticular pontine nucleus, caudal nTPM: 14.6
2559
Male, age 74, both hemispheres
18.1
2092
Male, age 76, both hemispheres
15.0
2457
Female, age 91, both hemispheres
14.0
2332
Male, age 80, right hemisphere
11.4
Reticular pontine nucleus, oral nTPM: 16.1
2167
Male, age 76, both hemispheres
23.2
1939
Male, age 80, both hemispheres
21.0
2012
Female, age 85, both hemispheres
18.4
2366
Female, age 91, both hemispheres
10.0
2361
Male, age 74, both hemispheres
7.7
Reticulotegmental nucleus nTPM: 20.2
2325
Male, age 76, both hemispheres
22.4
2452
Male, age 74, both hemispheres
21.2
2322
Female, age 91, both hemispheres
18.9
2333
Male, age 80, both hemispheres
18.4
Spinal trigeminal nucleus, oral nTPM: 16.9
1978
Male, age 76, both hemispheres
20.4
2164
Male, age 80, both hemispheres
16.7
2737
Female, age 85, both hemispheres
13.6
Subcoeruleus area nTPM: 21.5
2451
Male, age 74, both hemispheres
27.6
2323
Female, age 91, left hemisphere
25.0
1958
Male, age 80, both hemispheres
20.6
2369
Female, age 85, left hemisphere
18.3
2089
Male, age 76, left hemisphere
15.9
Superior olive nTPM: 12.5
2561
Female, age 91, both hemispheres
15.3
2020
Male, age 76, both hemispheres
12.8
1875
Female, age 85, both hemispheres
11.9
2329
Male, age 80, right hemisphere
11.7
2364
Male, age 74, right hemisphere
10.7
Ventral periolivary nuclei nTPM: 13.6
2165
Male, age 80, both hemispheres
14.6
2130
Female, age 85, both hemispheres
14.5
2023
Male, age 76, both hemispheres
14.0
2794
Female, age 91, left hemisphere
11.5
Ventrolateral tegmental area, A5 NE cell group nTPM: 15.3
2359
Male, age 61, both hemispheres
21.2
1959
Male, age 76, both hemispheres
16.4
2840
Female, age 85, both hemispheres
16.1
2456
Female, age 91, both hemispheres
13.7
2161
Male, age 80, both hemispheres
12.5
2449
Male, age 74, both hemispheres
12.1
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
