HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:30.7 nTPM
HPA Brain:156.9 nTPM
GTEx:30.7 nTPM
FANTOM5:171.9 Scaled Tags Per Million
Pig:264.1 nTPM
Mouse:328.7 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA015655Antibody CAB012405
Glial cells MediumNot detected
Neuronal cells HighHigh




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 156.9
Sample id Sample description nTPM
Hippocampus
nTPM: 125.3
1898 Male, age 80, left hemisphere 170.3
2529 Female, age 94, left hemisphere 140.4
2148 Female, age 91, left hemisphere 123.7
1911 Female, age 85, right hemisphere 113.2
2621 Female, age 67, right hemisphere 109.1
1855 Male, age 76, left hemisphere 95.1
Dentate gyrus
nTPM: 135.2
1927 Female, age 91, both hemispheres 200.2
2528 Male, age 74, both hemispheres 185.8
2530 Female, age 94, left hemisphere 110.2
2010 Male, age 76, both hemispheres 108.0
2246 Female, age 85, both hemispheres 104.4
2531 Female, age 67, both hemispheres 102.9
Entorhinal gyrus
nTPM: 111.0
1938 Female, age 85, left hemisphere 152.2
2613 Female, age 94, left hemisphere 151.1
2764 Male, age 80, right hemisphere 120.2
1787 Male, age 76, left hemisphere 98.0
2117 Female, age 91, right hemisphere 87.8
2686 Male, age 75, right hemisphere 56.4
Hippocampus, CA1
nTPM: 151.0
2749 Male, age 80, left hemisphere 295.8
2045 Male, age 76, both hemispheres 144.6
1873 Female, age 85, both hemispheres 135.0
2527 Male, age 74, both hemispheres 118.3
2082 Female, age 91, right hemisphere 61.3
Hippocampus, CA2
nTPM: 111.2
1892 Male, age 76, both hemispheres 155.7
1963 Male, age 80, left hemisphere 132.5
2249 Male, age 74, both hemispheres 115.1
2437 Female, age 94, left hemisphere 112.0
1940 Female, age 85, left hemisphere 79.7
2113 Female, age 91, right hemisphere 72.1
Hippocampus, CA3
nTPM: 156.9
2620 Female, age 94, left hemisphere 213.7
2137 Male, age 80, left hemisphere 210.9
1867 Male, age 76, both hemispheres 177.0
1891 Female, age 85, both hemispheres 143.2
2436 Male, age 74, both hemispheres 106.9
2861 Female, age 67, both hemispheres 89.8
Parahippocampal cortex
nTPM: 105.3
1990 Female, age 91, right hemisphere 150.6
1850 Male, age 80, both hemispheres 147.9
1933 Female, age 85, both hemispheres 120.7
2245 Female, age 91, both hemispheres 107.4
2693 Female, age 94, both hemispheres 104.5
2532 Female, age 72, left hemisphere 104.1
2250 Female, age 67, right hemisphere 100.9
2018 Male, age 76, both hemispheres 78.3
2622 Female, age 67, right hemisphere 75.7
2692 Male, age 74, both hemispheres 63.1
Perirhinal gyrus
nTPM: 128.5
1847 Female, age 91, left hemisphere 182.6
1794 Male, age 80, right hemisphere 125.9
1841 Female, age 85, right hemisphere 123.8
2521 Female, age 94, right hemisphere 119.5
2848 Male, age 76, right hemisphere 90.7
Subiculum
nTPM: 120.3
1901 Male, age 80, both hemispheres 175.1
1977 Female, age 85, both hemispheres 137.6
2729 Female, age 91, right hemisphere 116.7
2438 Female, age 94, left hemisphere 115.1
2042 Male, age 76, both hemispheres 100.6
2619 Male, age 74, both hemispheres 76.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 30.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.7
Samples: 197

Max nTPM: 137.2
Min nTPM: 3.0
Std nTPM: 25.5
Median nTPM: 24.4
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 137.2
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 126.0
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 117.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 115.0
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 104.3
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 100.8
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 97.4
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 94.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 88.5
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 85.0
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 81.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 171.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 171.9
FF:10153-102I9 76 years, female 174.5
FF:10169-103B7 60 years, female 169.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 264.1
Pig sample Sample description nTPM
Subiculum
nTPM: 171.4
Samples: 4

Max nTPM: 213.6
Min nTPM: 148.4
Sample A Female 213.6
Sample B Female 148.4
Sample C Male 158.7
Sample D Male 164.7
Dorsal hippocampus
nTPM: 163.6
Samples: 4

Max nTPM: 193.6
Min nTPM: 143.1
Sample A Female 166.6
Sample B Female 151.1
Sample C Male 193.6
Sample D Male 143.1
Entorhinal cortex
nTPM: 264.2
Samples: 4

Max nTPM: 291.0
Min nTPM: 249.3
Sample A Female 260.2
Sample B Female 291.0
Sample C Male 249.3
Sample D Male 256.1
Ventral hippocampus
nTPM: 131.2
Samples: 4

Max nTPM: 144.6
Min nTPM: 120.2
Sample A Female 122.7
Sample B Female 120.2
Sample C Male 137.2
Sample D Male 144.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 328.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 328.8
Samples: 4

Max nTPM: 407.7
Min nTPM: 286.7
Sample A Male 301.4
Sample B Male 319.2
Sample C Female 286.7
Sample D Female 407.7
Hippocampal formation
nTPM: 232.5
Samples: 4

Max nTPM: 250.1
Min nTPM: 210.0
Sample A Male 232.8
Sample B Male 250.1
Sample C Female 237.0
Sample D Female 210.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
69169654 Antisense, RP_050321_04_A03, Mouse strain C57BL/6J (56 days, male) 0.1

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