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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
1133.9
nTPM
FANTOM5:
932.3
Scaled Tags Per Million
Pig:
1713.7
nTPM
PONS - HPA Brain RNA-seq
Max nTPM
1133.9
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 1087.1
2090
Male, age 80, both hemispheres
1247.5
2188
Female, age 91, both hemispheres
1203.8
2301
Female, age 85, both hemispheres
1152.0
1984
Male, age 76, both hemispheres
745.1
Dorsal cochlear nucleus nTPM: 1049.4
2378
Male, age 80, both hemispheres
1248.4
2187
Female, age 91, both hemispheres
1160.8
2802
Male, age 74, right hemisphere
1081.8
2370
Male, age 61, both hemispheres
965.9
2058
Male, age 76, both hemispheres
790.0
Dorsal tegmental nucleus nTPM: 1024.5
2326
Male, age 74, both hemispheres
1182.3
2358
Male, age 61, both hemispheres
1041.3
1936
Male, age 76, left hemisphere
941.6
2083
Male, age 80, both hemispheres
932.9
Dorsolateral tegmental area nTPM: 1007.0
2337
Male, age 61, both hemispheres
1220.2
2654
Male, age 80, both hemispheres
1138.5
2360
Male, age 74, both hemispheres
986.1
2751
Female, age 85, both hemispheres
967.7
2141
Male, age 76, both hemispheres
722.6
Kolliker-Fuse nucleus nTPM: 1091.2
2315
Male, age 76, right hemisphere
1302.5
2793
Female, age 91, left hemisphere
1074.0
2163
Male, age 80, both hemispheres
897.2
Lateral lemniscal nuclei nTPM: 797.5
2746
Female, age 85, left hemisphere
896.8
2320
Female, age 91, left hemisphere
821.3
2036
Male, age 80, both hemispheres
779.2
2169
Male, age 76, both hemispheres
763.0
2453
Male, age 74, right hemisphere
727.0
Lateral parabrachial nucleus nTPM: 1110.7
2792
Male, age 76, both hemispheres
1360.3
2013
Male, age 80, both hemispheres
1249.3
2139
Female, age 85, right hemisphere
967.1
2790
Male, age 61, both hemispheres
866.2
Lateral vestibular nucleus nTPM: 1027.1
2311
Male, age 80, both hemispheres
1256.3
2184
Male, age 76, both hemispheres
797.9
Locus coeruleus nTPM: 898.8
2720
Male, age 74, both hemispheres
1102.3
2123
Female, age 91, both hemispheres
942.1
2788
Male, age 74, unknown
929.3
2162
Male, age 80, both hemispheres
878.9
2014
Male, age 55, unknown
836.1
2317
Female, age 72, unknown
822.8
1980
Male, age 76, both hemispheres
780.3
Medial parabrachial nucleus nTPM: 987.0
2854
Male, age 80, both hemispheres
1225.0
2170
Female, age 91, both hemispheres
1187.6
2786
Male, age 76, both hemispheres
871.0
2156
Male, age 61, both hemispheres
851.0
2463
Female, age 85, right hemisphere
800.6
Medial periolivary nuclei nTPM: 905.8
2081
Male, age 80, both hemispheres
1034.5
2458
Female, age 91, both hemispheres
954.8
2791
Male, age 74, right hemisphere
924.3
2063
Male, age 76, both hemispheres
860.6
2171
Female, age 85, both hemispheres
754.9
Motor facial nucleus nTPM: 901.2
2697
Female, age 85, both hemispheres
1084.5
2365
Male, age 74, right hemisphere
1004.5
2795
Female, age 91, both hemispheres
951.8
2126
Male, age 61, both hemispheres
923.7
2062
Male, age 76, both hemispheres
807.1
2327
Male, age 80, both hemispheres
635.7
Motor trigeminal nucleus nTPM: 880.4
2321
Female, age 91, both hemispheres
971.1
2335
Male, age 61, both hemispheres
933.3
2560
Male, age 74, both hemispheres
928.3
2309
Male, age 76, both hemispheres
809.0
2079
Male, age 80, both hemispheres
760.4
Nuclei of the trapezoid body nTPM: 808.6
1983
Male, age 76, both hemispheres
949.4
2166
Male, age 80, both hemispheres
837.1
2159
Male, age 61, both hemispheres
779.6
2368
Female, age 91, both hemispheres
771.4
2735
Female, age 85, both hemispheres
705.6
Nucleus raphe magnus nTPM: 823.6
2051
Male, age 76, both hemispheres
953.7
2459
Female, age 91, both hemispheres
923.8
2455
Male, age 74, both hemispheres
813.7
2328
Male, age 80, both hemispheres
791.1
2160
Male, age 61, both hemispheres
731.6
2172
Female, age 85, both hemispheres
727.6
Paramedian reticular nucleus nTPM: 1050.4
2052
Male, age 76, both hemispheres
1364.4
2313
Male, age 61, both hemispheres
999.8
2050
Female, age 85, both hemispheres
941.8
2057
Male, age 80, both hemispheres
895.7
Pedunculopontine tegmental nucleus nTPM: 988.8
2338
Male, age 61, both hemispheres
1215.1
2334
Male, age 80, both hemispheres
1042.4
1921
Female, age 85, both hemispheres
708.8
Pontine nuclei nTPM: 909.2
2319
Female, age 91, both hemispheres
1121.9
2454
Male, age 74, left hemisphere
1000.8
2115
Male, age 80, left hemisphere
962.4
2109
Female, age 72, unknown
962.3
1863
Male, age 55, unknown
895.2
1968
Male, age 76, left hemisphere
802.3
2727
Male, age 61, right hemisphere
777.5
2787
Female, age 85, both hemispheres
751.2
Pontine raphe nucleus nTPM: 845.6
2853
Male, age 76, midline
884.3
2122
Female, age 85, midline
806.8
Posteroventral cochlear nucleus nTPM: 1133.9
2341
Male, age 80, both hemispheres
1600.2
2135
Female, age 91, both hemispheres
1247.4
2371
Male, age 61, both hemispheres
1079.5
2752
Female, age 85, both hemispheres
887.3
2070
Male, age 76, both hemispheres
855.2
Principal sensory trigeminal nucleus nTPM: 836.1
2367
Female, age 91, left hemisphere
976.0
2324
Male, age 76, both hemispheres
869.0
2158
Male, age 61, both hemispheres
771.0
2008
Male, age 80, left hemisphere
728.3
Reticular pontine nucleus, caudal nTPM: 893.5
2457
Female, age 91, both hemispheres
1066.2
2559
Male, age 74, both hemispheres
988.7
2092
Male, age 76, both hemispheres
873.5
2332
Male, age 80, right hemisphere
645.4
Reticular pontine nucleus, oral nTPM: 957.6
2361
Male, age 74, both hemispheres
1128.3
2366
Female, age 91, both hemispheres
1004.2
1939
Male, age 80, both hemispheres
972.6
2167
Male, age 76, both hemispheres
877.6
2012
Female, age 85, both hemispheres
805.6
Reticulotegmental nucleus nTPM: 893.9
2322
Female, age 91, both hemispheres
1003.2
2452
Male, age 74, both hemispheres
947.1
2333
Male, age 80, both hemispheres
853.6
2325
Male, age 76, both hemispheres
771.8
Spinal trigeminal nucleus, oral nTPM: 814.8
2164
Male, age 80, both hemispheres
962.3
1978
Male, age 76, both hemispheres
759.7
2737
Female, age 85, both hemispheres
722.4
Subcoeruleus area nTPM: 893.2
2369
Female, age 85, left hemisphere
1030.7
2451
Male, age 74, both hemispheres
986.9
1958
Male, age 80, both hemispheres
920.6
2323
Female, age 91, left hemisphere
819.2
2089
Male, age 76, left hemisphere
708.6
Superior olive nTPM: 886.7
2364
Male, age 74, right hemisphere
987.0
2020
Male, age 76, both hemispheres
957.5
2561
Female, age 91, both hemispheres
941.0
1875
Female, age 85, both hemispheres
778.7
2329
Male, age 80, right hemisphere
769.3
Ventral periolivary nuclei nTPM: 874.7
2023
Male, age 76, both hemispheres
987.9
2794
Female, age 91, left hemisphere
947.1
2165
Male, age 80, both hemispheres
818.2
2130
Female, age 85, both hemispheres
745.5
Ventrolateral tegmental area, A5 NE cell group nTPM: 954.3
2359
Male, age 61, both hemispheres
1115.3
2840
Female, age 85, both hemispheres
1113.7
2161
Male, age 80, both hemispheres
996.3
1959
Male, age 76, both hemispheres
878.7
2456
Female, age 91, both hemispheres
874.5
2449
Male, age 74, both hemispheres
747.5
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
