HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:48.4 nTPM
HPA Brain:60.6 nTPM
GTEx:48.4 nTPM
FANTOM5:57.8 Scaled Tags Per Million
Pig:46.7 nTPM
Mouse:86.7 nTPM
Allen mouse:3.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034868Antibody HPA056572
Glial cells Not detectedNot detected
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 60.6
Sample id Sample description nTPM
Hippocampus
nTPM: 60.6
2621 Female, age 67, right hemisphere 67.9
2529 Female, age 94, left hemisphere 66.8
2148 Female, age 91, left hemisphere 63.6
1911 Female, age 85, right hemisphere 61.3
1898 Male, age 80, left hemisphere 57.5
1855 Male, age 76, left hemisphere 46.5
Dentate gyrus
nTPM: 56.8
1927 Female, age 91, both hemispheres 65.9
2531 Female, age 67, both hemispheres 62.8
2530 Female, age 94, left hemisphere 60.3
2528 Male, age 74, both hemispheres 52.5
2010 Male, age 76, both hemispheres 50.9
2246 Female, age 85, both hemispheres 48.3
Entorhinal gyrus
nTPM: 51.8
2613 Female, age 94, left hemisphere 58.2
2686 Male, age 75, right hemisphere 56.8
2764 Male, age 80, right hemisphere 54.5
1938 Female, age 85, left hemisphere 51.3
1787 Male, age 76, left hemisphere 45.5
2117 Female, age 91, right hemisphere 44.3
Hippocampus, CA1
nTPM: 53.4
2749 Male, age 80, left hemisphere 66.5
1873 Female, age 85, both hemispheres 53.3
2527 Male, age 74, both hemispheres 52.5
2082 Female, age 91, right hemisphere 52.1
2045 Male, age 76, both hemispheres 42.6
Hippocampus, CA2
nTPM: 56.9
1963 Male, age 80, left hemisphere 85.2
2113 Female, age 91, right hemisphere 57.0
2437 Female, age 94, left hemisphere 56.7
1892 Male, age 76, both hemispheres 52.0
2249 Male, age 74, both hemispheres 46.2
1940 Female, age 85, left hemisphere 44.2
Hippocampus, CA3
nTPM: 58.3
2861 Female, age 67, both hemispheres 79.7
2137 Male, age 80, left hemisphere 63.2
2620 Female, age 94, left hemisphere 55.0
1867 Male, age 76, both hemispheres 54.1
2436 Male, age 74, both hemispheres 50.1
1891 Female, age 85, both hemispheres 47.7
Parahippocampal cortex
nTPM: 50.8
2245 Female, age 91, both hemispheres 64.9
2622 Female, age 67, right hemisphere 55.0
2250 Female, age 67, right hemisphere 53.3
2693 Female, age 94, both hemispheres 52.2
1990 Female, age 91, right hemisphere 50.5
1933 Female, age 85, both hemispheres 49.0
2692 Male, age 74, both hemispheres 48.7
2532 Female, age 72, left hemisphere 48.3
2018 Male, age 76, both hemispheres 43.7
1850 Male, age 80, both hemispheres 42.5
Perirhinal gyrus
nTPM: 48.1
2521 Female, age 94, right hemisphere 55.3
1847 Female, age 91, left hemisphere 54.9
1794 Male, age 80, right hemisphere 47.1
1841 Female, age 85, right hemisphere 43.7
2848 Male, age 76, right hemisphere 39.4
Subiculum
nTPM: 49.7
1901 Male, age 80, both hemispheres 52.8
2729 Female, age 91, right hemisphere 51.5
2438 Female, age 94, left hemisphere 51.1
2042 Male, age 76, both hemispheres 50.0
2619 Male, age 74, both hemispheres 46.8
1977 Female, age 85, both hemispheres 46.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 48.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 48.4
Samples: 197

Max nTPM: 139.9
Min nTPM: 17.2
Std nTPM: 18.0
Median nTPM: 47.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 139.9
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 106.5
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 106.5
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 99.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 97.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 96.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 87.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 82.6
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 82.6
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 82.5
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 81.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 57.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 57.8
FF:10153-102I9 76 years, female 64.8
FF:10169-103B7 60 years, female 50.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 46.7
Pig sample Sample description nTPM
Subiculum
nTPM: 34.5
Samples: 4

Max nTPM: 45.8
Min nTPM: 30.2
Sample A Female 45.8
Sample B Female 31.3
Sample C Male 30.2
Sample D Male 30.7
Dorsal hippocampus
nTPM: 46.7
Samples: 4

Max nTPM: 58.5
Min nTPM: 36.5
Sample A Female 58.5
Sample B Female 48.8
Sample C Male 42.8
Sample D Male 36.5
Entorhinal cortex
nTPM: 44.8
Samples: 4

Max nTPM: 51.0
Min nTPM: 40.0
Sample A Female 44.5
Sample B Female 43.7
Sample C Male 51.0
Sample D Male 40.0
Ventral hippocampus
nTPM: 41.8
Samples: 4

Max nTPM: 62.4
Min nTPM: 26.9
Sample A Female 34.4
Sample B Female 26.9
Sample C Male 43.3
Sample D Male 62.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 86.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 86.7
Samples: 4

Max nTPM: 92.6
Min nTPM: 81.2
Sample A Male 89.5
Sample B Male 92.6
Sample C Female 81.2
Sample D Female 83.4
Hippocampal formation
nTPM: 80.7
Samples: 4

Max nTPM: 83.3
Min nTPM: 76.9
Sample A Male 76.9
Sample B Male 83.2
Sample C Female 79.4
Sample D Female 83.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.6
67979028 Antisense, RP_040923_02_A09, Mouse strain C57BL/6J (56 days, male) 3.6

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