HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:46.1 nTPM
HPA Brain:53.7 nTPM
GTEx:46.1 nTPM
FANTOM5:62.5 Scaled Tags Per Million
Pig:45.4 nTPM
Mouse:86.5 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 53.7
Sample id Sample description nTPM
Hippocampus
nTPM: 46.4
1898 Male, age 80, left hemisphere 52.0
2621 Female, age 67, right hemisphere 48.6
2529 Female, age 94, left hemisphere 46.3
2148 Female, age 91, left hemisphere 46.2
1855 Male, age 76, left hemisphere 44.2
1911 Female, age 85, right hemisphere 41.1
Dentate gyrus
nTPM: 48.3
2010 Male, age 76, both hemispheres 52.8
2530 Female, age 94, left hemisphere 51.1
1927 Female, age 91, both hemispheres 50.7
2246 Female, age 85, both hemispheres 45.8
2528 Male, age 74, both hemispheres 45.2
2531 Female, age 67, both hemispheres 44.3
Entorhinal gyrus
nTPM: 50.4
2686 Male, age 75, right hemisphere 52.9
2764 Male, age 80, right hemisphere 52.8
1787 Male, age 76, left hemisphere 50.7
2613 Female, age 94, left hemisphere 49.1
1938 Female, age 85, left hemisphere 48.7
2117 Female, age 91, right hemisphere 48.2
Hippocampus, CA1
nTPM: 49.9
2749 Male, age 80, left hemisphere 56.1
1873 Female, age 85, both hemispheres 50.5
2045 Male, age 76, both hemispheres 49.8
2082 Female, age 91, right hemisphere 47.2
2527 Male, age 74, both hemispheres 45.7
Hippocampus, CA2
nTPM: 48.8
1963 Male, age 80, left hemisphere 57.2
1892 Male, age 76, both hemispheres 55.0
2437 Female, age 94, left hemisphere 46.1
2113 Female, age 91, right hemisphere 45.4
1940 Female, age 85, left hemisphere 44.9
2249 Male, age 74, both hemispheres 44.4
Hippocampus, CA3
nTPM: 44.9
1867 Male, age 76, both hemispheres 46.9
2137 Male, age 80, left hemisphere 45.3
1891 Female, age 85, both hemispheres 45.0
2620 Female, age 94, left hemisphere 44.7
2861 Female, age 67, both hemispheres 43.9
2436 Male, age 74, both hemispheres 43.6
Parahippocampal cortex
nTPM: 48.9
1850 Male, age 80, both hemispheres 56.5
2532 Female, age 72, left hemisphere 51.3
1990 Female, age 91, right hemisphere 50.8
1933 Female, age 85, both hemispheres 48.7
2245 Female, age 91, both hemispheres 48.7
2693 Female, age 94, both hemispheres 48.4
2250 Female, age 67, right hemisphere 47.4
2692 Male, age 74, both hemispheres 46.8
2622 Female, age 67, right hemisphere 46.4
2018 Male, age 76, both hemispheres 44.6
Perirhinal gyrus
nTPM: 53.7
1847 Female, age 91, left hemisphere 57.1
1841 Female, age 85, right hemisphere 55.6
1794 Male, age 80, right hemisphere 54.9
2521 Female, age 94, right hemisphere 50.4
2848 Male, age 76, right hemisphere 50.4
Subiculum
nTPM: 46.3
2438 Female, age 94, left hemisphere 54.1
1977 Female, age 85, both hemispheres 51.2
1901 Male, age 80, both hemispheres 47.6
2619 Male, age 74, both hemispheres 43.4
2729 Female, age 91, right hemisphere 42.9
2042 Male, age 76, both hemispheres 38.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 46.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 46.1
Samples: 197

Max nTPM: 81.4
Min nTPM: 24.8
Std nTPM: 9.3
Median nTPM: 45.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 81.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 71.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 66.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 66.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 66.4
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 64.7
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 64.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 63.5
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 63.3
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 63.1
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 62.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 62.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 62.5
FF:10169-103B7 60 years, female 72.7
FF:10153-102I9 76 years, female 52.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 45.4
Pig sample Sample description nTPM
Subiculum
nTPM: 38.1
Samples: 4

Max nTPM: 52.0
Min nTPM: 31.3
Sample A Female 52.0
Sample B Female 35.3
Sample C Male 33.8
Sample D Male 31.3
Dorsal hippocampus
nTPM: 45.4
Samples: 4

Max nTPM: 57.0
Min nTPM: 35.2
Sample A Female 57.0
Sample B Female 45.8
Sample C Male 43.4
Sample D Male 35.2
Entorhinal cortex
nTPM: 43.4
Samples: 4

Max nTPM: 48.4
Min nTPM: 37.6
Sample A Female 47.3
Sample B Female 48.4
Sample C Male 40.1
Sample D Male 37.6
Ventral hippocampus
nTPM: 41.6
Samples: 4

Max nTPM: 48.9
Min nTPM: 31.5
Sample A Female 40.9
Sample B Female 31.5
Sample C Male 48.9
Sample D Male 45.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 86.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 86.5
Samples: 4

Max nTPM: 88.1
Min nTPM: 83.9
Sample A Male 83.9
Sample B Male 88.1
Sample C Female 86.2
Sample D Female 87.8
Hippocampal formation
nTPM: 86.5
Samples: 4

Max nTPM: 94.2
Min nTPM: 82.3
Sample A Male 86.1
Sample B Male 83.3
Sample C Female 94.2
Sample D Female 82.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
67978685 Antisense, RP_040923_01_E10, Mouse strain C57BL/6J (56 days, male) 0.0

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