HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:32.7 nTPM
HPA Brain:19.5 nTPM
GTEx:32.7 nTPM
FANTOM5:116.0 Scaled Tags Per Million
Pig:39.0 nTPM
Mouse:19.4 nTPM
Allen mouse:11.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036424Antibody HPA040881
Glial cells Not detectedNot detected
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.5
Sample id Sample description nTPM
Hippocampus
nTPM: 18.7
1898 Male, age 80, left hemisphere 28.2
2621 Female, age 67, right hemisphere 22.2
1855 Male, age 76, left hemisphere 20.0
2529 Female, age 94, left hemisphere 16.7
1911 Female, age 85, right hemisphere 14.6
2148 Female, age 91, left hemisphere 10.8
Dentate gyrus
nTPM: 14.7
2010 Male, age 76, both hemispheres 22.9
1927 Female, age 91, both hemispheres 18.8
2528 Male, age 74, both hemispheres 14.3
2246 Female, age 85, both hemispheres 12.9
2530 Female, age 94, left hemisphere 10.4
2531 Female, age 67, both hemispheres 9.3
Entorhinal gyrus
nTPM: 14.7
2117 Female, age 91, right hemisphere 16.7
2686 Male, age 75, right hemisphere 16.5
1938 Female, age 85, left hemisphere 16.2
1787 Male, age 76, left hemisphere 16.1
2764 Male, age 80, right hemisphere 14.8
2613 Female, age 94, left hemisphere 7.6
Hippocampus, CA1
nTPM: 19.5
2749 Male, age 80, left hemisphere 33.7
1873 Female, age 85, both hemispheres 22.4
2045 Male, age 76, both hemispheres 15.2
2527 Male, age 74, both hemispheres 14.4
2082 Female, age 91, right hemisphere 11.9
Hippocampus, CA2
nTPM: 18.2
1963 Male, age 80, left hemisphere 27.6
1892 Male, age 76, both hemispheres 26.5
2249 Male, age 74, both hemispheres 18.5
1940 Female, age 85, left hemisphere 16.8
2437 Female, age 94, left hemisphere 10.0
2113 Female, age 91, right hemisphere 9.6
Hippocampus, CA3
nTPM: 16.5
1867 Male, age 76, both hemispheres 22.4
2137 Male, age 80, left hemisphere 21.9
1891 Female, age 85, both hemispheres 16.6
2436 Male, age 74, both hemispheres 16.6
2861 Female, age 67, both hemispheres 11.4
2620 Female, age 94, left hemisphere 10.0
Parahippocampal cortex
nTPM: 13.9
1850 Male, age 80, both hemispheres 22.6
1933 Female, age 85, both hemispheres 15.7
2622 Female, age 67, right hemisphere 13.9
2693 Female, age 94, both hemispheres 13.7
2532 Female, age 72, left hemisphere 13.4
1990 Female, age 91, right hemisphere 13.3
2018 Male, age 76, both hemispheres 12.0
2250 Female, age 67, right hemisphere 12.0
2245 Female, age 91, both hemispheres 11.7
2692 Male, age 74, both hemispheres 10.5
Perirhinal gyrus
nTPM: 17.5
1847 Female, age 91, left hemisphere 21.6
1794 Male, age 80, right hemisphere 19.4
1841 Female, age 85, right hemisphere 19.4
2848 Male, age 76, right hemisphere 15.5
2521 Female, age 94, right hemisphere 11.7
Subiculum
nTPM: 16.9
1901 Male, age 80, both hemispheres 23.5
1977 Female, age 85, both hemispheres 18.7
2729 Female, age 91, right hemisphere 17.2
2042 Male, age 76, both hemispheres 15.7
2619 Male, age 74, both hemispheres 13.4
2438 Female, age 94, left hemisphere 13.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 32.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.7
Samples: 197

Max nTPM: 44.9
Min nTPM: 23.5
Std nTPM: 3.8
Median nTPM: 32.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 44.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 42.5
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 42.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 41.7
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 41.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 41.0
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 39.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 39.6
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 39.5
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 39.3
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 39.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 116.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 116.0
FF:10169-103B7 60 years, female 126.7
FF:10153-102I9 76 years, female 105.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 39.0
Pig sample Sample description nTPM
Subiculum
nTPM: 36.4
Samples: 4

Max nTPM: 40.4
Min nTPM: 34.6
Sample A Female 40.4
Sample B Female 35.6
Sample C Male 35.1
Sample D Male 34.6
Dorsal hippocampus
nTPM: 38.6
Samples: 4

Max nTPM: 40.8
Min nTPM: 36.5
Sample A Female 40.8
Sample B Female 39.6
Sample C Male 37.6
Sample D Male 36.5
Entorhinal cortex
nTPM: 39.1
Samples: 4

Max nTPM: 41.8
Min nTPM: 36.7
Sample A Female 41.8
Sample B Female 40.7
Sample C Male 36.7
Sample D Male 37.0
Ventral hippocampus
nTPM: 37.3
Samples: 4

Max nTPM: 42.5
Min nTPM: 32.3
Sample A Female 42.5
Sample B Female 37.5
Sample C Male 32.3
Sample D Male 37.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.4
Samples: 4

Max nTPM: 20.8
Min nTPM: 18.1
Sample A Male 19.2
Sample B Male 20.8
Sample C Female 18.1
Sample D Female 19.6
Hippocampal formation
nTPM: 18.0
Samples: 4

Max nTPM: 18.8
Min nTPM: 17.1
Sample A Male 18.8
Sample B Male 18.7
Sample C Female 17.1
Sample D Female 17.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.1
68443184 Antisense, RP_050111_01_E06, Mouse strain C57BL/6J (56 days, male) 11.1

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