HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:10.3 nTPM
HPA Brain:23.3 nTPM
GTEx:10.3 nTPM
FANTOM5:15.7 Scaled Tags Per Million
Pig:10.6 nTPM
Mouse:14.4 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047408
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 23.3
Sample id Sample description nTPM
Hippocampus
nTPM: 18.7
2621 Female, age 67, right hemisphere 21.2
1911 Female, age 85, right hemisphere 20.8
2529 Female, age 94, left hemisphere 19.4
2148 Female, age 91, left hemisphere 18.3
1898 Male, age 80, left hemisphere 16.7
1855 Male, age 76, left hemisphere 15.8
Dentate gyrus
nTPM: 19.5
2530 Female, age 94, left hemisphere 25.2
2010 Male, age 76, both hemispheres 22.0
2528 Male, age 74, both hemispheres 20.4
2531 Female, age 67, both hemispheres 18.8
2246 Female, age 85, both hemispheres 15.9
1927 Female, age 91, both hemispheres 14.8
Entorhinal gyrus
nTPM: 17.5
2117 Female, age 91, right hemisphere 23.2
2764 Male, age 80, right hemisphere 20.8
2613 Female, age 94, left hemisphere 16.0
2686 Male, age 75, right hemisphere 15.4
1787 Male, age 76, left hemisphere 14.9
1938 Female, age 85, left hemisphere 14.4
Hippocampus, CA1
nTPM: 16.7
2082 Female, age 91, right hemisphere 20.1
2527 Male, age 74, both hemispheres 17.5
1873 Female, age 85, both hemispheres 17.0
2045 Male, age 76, both hemispheres 16.9
2749 Male, age 80, left hemisphere 12.2
Hippocampus, CA2
nTPM: 18.5
2113 Female, age 91, right hemisphere 20.5
2437 Female, age 94, left hemisphere 20.3
1940 Female, age 85, left hemisphere 19.7
2249 Male, age 74, both hemispheres 19.7
1963 Male, age 80, left hemisphere 18.4
1892 Male, age 76, both hemispheres 12.3
Hippocampus, CA3
nTPM: 16.4
1891 Female, age 85, both hemispheres 22.2
2436 Male, age 74, both hemispheres 18.2
1867 Male, age 76, both hemispheres 17.2
2620 Female, age 94, left hemisphere 16.3
2861 Female, age 67, both hemispheres 13.4
2137 Male, age 80, left hemisphere 11.1
Parahippocampal cortex
nTPM: 17.6
2018 Male, age 76, both hemispheres 22.2
2532 Female, age 72, left hemisphere 21.8
2692 Male, age 74, both hemispheres 19.3
2693 Female, age 94, both hemispheres 18.7
1990 Female, age 91, right hemisphere 18.5
2245 Female, age 91, both hemispheres 16.7
2250 Female, age 67, right hemisphere 16.7
1850 Male, age 80, both hemispheres 15.1
1933 Female, age 85, both hemispheres 14.3
2622 Female, age 67, right hemisphere 13.1
Perirhinal gyrus
nTPM: 14.2
2521 Female, age 94, right hemisphere 16.2
1841 Female, age 85, right hemisphere 15.6
1794 Male, age 80, right hemisphere 14.2
1847 Female, age 91, left hemisphere 13.1
2848 Male, age 76, right hemisphere 11.9
Subiculum
nTPM: 23.3
2042 Male, age 76, both hemispheres 30.7
2438 Female, age 94, left hemisphere 24.1
1901 Male, age 80, both hemispheres 23.7
2729 Female, age 91, right hemisphere 21.2
2619 Male, age 74, both hemispheres 20.4
1977 Female, age 85, both hemispheres 19.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.3
Samples: 197

Max nTPM: 37.8
Min nTPM: 3.1
Std nTPM: 5.6
Median nTPM: 8.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 37.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 35.4
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 31.1
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 25.7
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 25.2
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 24.4
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 22.6
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 21.9
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 20.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 20.4
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 20.0
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 15.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 15.7
FF:10153-102I9 76 years, female 19.0
FF:10169-103B7 60 years, female 12.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.6
Pig sample Sample description nTPM
Subiculum
nTPM: 10.6
Samples: 4

Max nTPM: 15.6
Min nTPM: 6.4
Sample A Female 15.6
Sample B Female 9.7
Sample C Male 10.7
Sample D Male 6.4
Dorsal hippocampus
nTPM: 8.1
Samples: 4

Max nTPM: 12.9
Min nTPM: 5.7
Sample A Female 6.2
Sample B Female 7.5
Sample C Male 12.9
Sample D Male 5.7
Entorhinal cortex
nTPM: 7.6
Samples: 4

Max nTPM: 8.2
Min nTPM: 6.9
Sample A Female 6.9
Sample B Female 7.0
Sample C Male 8.2
Sample D Male 8.2
Ventral hippocampus
nTPM: 6.1
Samples: 4

Max nTPM: 6.4
Min nTPM: 5.9
Sample A Female 6.1
Sample B Female 5.9
Sample C Male 6.4
Sample D Male 6.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.4
Samples: 4

Max nTPM: 17.1
Min nTPM: 12.6
Sample A Male 12.6
Sample B Male 13.5
Sample C Female 17.1
Sample D Female 14.3
Hippocampal formation
nTPM: 11.3
Samples: 4

Max nTPM: 12.2
Min nTPM: 10.4
Sample A Male 11.7
Sample B Male 10.7
Sample C Female 10.4
Sample D Female 12.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
67765723 Antisense, RP_040916_01_F08, Mouse strain C57BL/6J (56 days, male) 0.6
77371807 Antisense, RP_070116_01_C12, Mouse strain C57BL/6J (56 days, male) 0.3
70919316 Antisense, RP_050713_01_B01, Mouse strain C57BL/6J (56 days, male) 0.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org