HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:20.4 nTPM
HPA Brain:89.6 nTPM
GTEx:20.4 nTPM
FANTOM5:52.4 Scaled Tags Per Million
Pig:68.4 nTPM
Mouse:42.6 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027424
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 89.6
Sample id Sample description nTPM
Hippocampus
nTPM: 78.8
1855 Male, age 76, left hemisphere 85.0
2148 Female, age 91, left hemisphere 82.1
2529 Female, age 94, left hemisphere 79.9
1898 Male, age 80, left hemisphere 79.7
2621 Female, age 67, right hemisphere 75.0
1911 Female, age 85, right hemisphere 71.0
Dentate gyrus
nTPM: 79.2
2531 Female, age 67, both hemispheres 84.1
2246 Female, age 85, both hemispheres 83.0
1927 Female, age 91, both hemispheres 82.1
2010 Male, age 76, both hemispheres 81.3
2530 Female, age 94, left hemisphere 73.9
2528 Male, age 74, both hemispheres 70.6
Entorhinal gyrus
nTPM: 79.7
1938 Female, age 85, left hemisphere 90.2
1787 Male, age 76, left hemisphere 86.5
2764 Male, age 80, right hemisphere 86.5
2117 Female, age 91, right hemisphere 75.1
2613 Female, age 94, left hemisphere 69.8
2686 Male, age 75, right hemisphere 69.8
Hippocampus, CA1
nTPM: 82.8
2045 Male, age 76, both hemispheres 92.5
2749 Male, age 80, left hemisphere 83.2
1873 Female, age 85, both hemispheres 82.8
2082 Female, age 91, right hemisphere 78.8
2527 Male, age 74, both hemispheres 76.5
Hippocampus, CA2
nTPM: 76.2
1963 Male, age 80, left hemisphere 85.4
1892 Male, age 76, both hemispheres 78.7
2113 Female, age 91, right hemisphere 77.0
1940 Female, age 85, left hemisphere 74.2
2437 Female, age 94, left hemisphere 73.2
2249 Male, age 74, both hemispheres 68.6
Hippocampus, CA3
nTPM: 79.4
2620 Female, age 94, left hemisphere 89.7
2861 Female, age 67, both hemispheres 83.3
2137 Male, age 80, left hemisphere 80.8
1891 Female, age 85, both hemispheres 76.8
2436 Male, age 74, both hemispheres 76.1
1867 Male, age 76, both hemispheres 70.0
Parahippocampal cortex
nTPM: 79.2
1850 Male, age 80, both hemispheres 89.3
1990 Female, age 91, right hemisphere 85.1
1933 Female, age 85, both hemispheres 84.8
2532 Female, age 72, left hemisphere 84.0
2245 Female, age 91, both hemispheres 79.2
2018 Male, age 76, both hemispheres 76.1
2692 Male, age 74, both hemispheres 75.9
2250 Female, age 67, right hemisphere 74.1
2622 Female, age 67, right hemisphere 71.9
2693 Female, age 94, both hemispheres 71.9
Perirhinal gyrus
nTPM: 89.6
2848 Male, age 76, right hemisphere 94.9
1847 Female, age 91, left hemisphere 94.5
1794 Male, age 80, right hemisphere 93.8
1841 Female, age 85, right hemisphere 87.9
2521 Female, age 94, right hemisphere 76.7
Subiculum
nTPM: 75.6
1977 Female, age 85, both hemispheres 83.4
2438 Female, age 94, left hemisphere 76.6
2619 Male, age 74, both hemispheres 75.3
1901 Male, age 80, both hemispheres 74.6
2729 Female, age 91, right hemisphere 72.7
2042 Male, age 76, both hemispheres 70.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.4
Samples: 197

Max nTPM: 32.4
Min nTPM: 11.4
Std nTPM: 3.9
Median nTPM: 20.2
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 32.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 31.7
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 30.7
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 30.7
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 30.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 28.9
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 28.7
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 27.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 27.5
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 27.5
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 27.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 52.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 52.4
FF:10153-102I9 76 years, female 58.2
FF:10169-103B7 60 years, female 46.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 68.4
Pig sample Sample description nTPM
Subiculum
nTPM: 68.4
Samples: 4

Max nTPM: 77.9
Min nTPM: 61.3
Sample A Female 77.9
Sample B Female 65.8
Sample C Male 68.5
Sample D Male 61.3
Dorsal hippocampus
nTPM: 66.9
Samples: 4

Max nTPM: 71.0
Min nTPM: 61.0
Sample A Female 71.0
Sample B Female 68.7
Sample C Male 66.9
Sample D Male 61.0
Entorhinal cortex
nTPM: 61.8
Samples: 4

Max nTPM: 66.6
Min nTPM: 57.1
Sample A Female 66.6
Sample B Female 57.1
Sample C Male 65.1
Sample D Male 58.3
Ventral hippocampus
nTPM: 67.4
Samples: 4

Max nTPM: 80.1
Min nTPM: 55.4
Sample A Female 66.2
Sample B Female 55.4
Sample C Male 80.1
Sample D Male 67.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 42.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 42.6
Samples: 4

Max nTPM: 52.1
Min nTPM: 38.9
Sample A Male 39.4
Sample B Male 40.0
Sample C Female 38.9
Sample D Female 52.1
Hippocampal formation
nTPM: 39.7
Samples: 4

Max nTPM: 46.0
Min nTPM: 35.2
Sample A Male 35.3
Sample B Male 42.2
Sample C Female 46.0
Sample D Female 35.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
73424038 Antisense, RP_051019_03_C07, Mouse strain C57BL/6J (56 days, male) 0.0

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