We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
463.6
nTPM
FANTOM5:
756.6
Scaled Tags Per Million
Pig:
68.1
nTPM
Allen mouse:
1.3
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
463.6
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 322.5
1984
Male, age 76, both hemispheres
369.7
2301
Female, age 85, both hemispheres
368.6
2090
Male, age 80, both hemispheres
316.3
2188
Female, age 91, both hemispheres
235.6
Dorsal cochlear nucleus nTPM: 379.3
2058
Male, age 76, both hemispheres
477.5
2802
Male, age 74, right hemisphere
421.7
2378
Male, age 80, both hemispheres
350.2
2370
Male, age 61, both hemispheres
332.7
2187
Female, age 91, both hemispheres
314.2
Dorsal tegmental nucleus nTPM: 412.6
2358
Male, age 61, both hemispheres
509.1
1936
Male, age 76, left hemisphere
438.2
2326
Male, age 74, both hemispheres
363.2
2083
Male, age 80, both hemispheres
339.8
Dorsolateral tegmental area nTPM: 316.5
2360
Male, age 74, both hemispheres
380.4
2654
Male, age 80, both hemispheres
335.5
2337
Male, age 61, both hemispheres
318.5
2141
Male, age 76, both hemispheres
314.4
2751
Female, age 85, both hemispheres
233.6
Kolliker-Fuse nucleus nTPM: 463.6
2315
Male, age 76, right hemisphere
920.4
2163
Male, age 80, both hemispheres
285.7
2793
Female, age 91, left hemisphere
184.6
Lateral lemniscal nuclei nTPM: 184.6
2746
Female, age 85, left hemisphere
239.5
2169
Male, age 76, both hemispheres
219.7
2453
Male, age 74, right hemisphere
170.4
2036
Male, age 80, both hemispheres
163.9
2320
Female, age 91, left hemisphere
129.3
Lateral parabrachial nucleus nTPM: 411.7
2792
Male, age 76, both hemispheres
612.3
2139
Female, age 85, right hemisphere
381.2
2013
Male, age 80, both hemispheres
336.0
2790
Male, age 61, both hemispheres
317.1
Lateral vestibular nucleus nTPM: 307.7
2311
Male, age 80, both hemispheres
333.2
2184
Male, age 76, both hemispheres
282.2
Locus coeruleus nTPM: 305.4
2788
Male, age 74, unknown
341.5
1980
Male, age 76, both hemispheres
340.3
2123
Female, age 91, both hemispheres
334.5
2317
Female, age 72, unknown
314.3
2014
Male, age 55, unknown
272.2
2720
Male, age 74, both hemispheres
269.8
2162
Male, age 80, both hemispheres
265.1
Medial parabrachial nucleus nTPM: 296.6
2156
Male, age 61, both hemispheres
407.8
2786
Male, age 76, both hemispheres
302.7
2170
Female, age 91, both hemispheres
269.5
2854
Male, age 80, both hemispheres
269.2
2463
Female, age 85, right hemisphere
233.7
Medial periolivary nuclei nTPM: 230.8
2791
Male, age 74, right hemisphere
289.2
2063
Male, age 76, both hemispheres
270.4
2081
Male, age 80, both hemispheres
228.9
2171
Female, age 85, both hemispheres
191.1
2458
Female, age 91, both hemispheres
174.5
Motor facial nucleus nTPM: 241.8
2126
Male, age 61, both hemispheres
289.2
2795
Female, age 91, both hemispheres
272.9
2062
Male, age 76, both hemispheres
256.3
2365
Male, age 74, right hemisphere
241.5
2697
Female, age 85, both hemispheres
231.0
2327
Male, age 80, both hemispheres
159.6
Motor trigeminal nucleus nTPM: 226.1
2309
Male, age 76, both hemispheres
304.9
2335
Male, age 61, both hemispheres
263.3
2560
Male, age 74, both hemispheres
203.2
2321
Female, age 91, both hemispheres
186.9
2079
Male, age 80, both hemispheres
172.1
Nuclei of the trapezoid body nTPM: 228.3
1983
Male, age 76, both hemispheres
310.8
2166
Male, age 80, both hemispheres
224.8
2368
Female, age 91, both hemispheres
222.0
2735
Female, age 85, both hemispheres
210.8
2159
Male, age 61, both hemispheres
173.2
Nucleus raphe magnus nTPM: 203.7
2051
Male, age 76, both hemispheres
312.8
2455
Male, age 74, both hemispheres
227.6
2328
Male, age 80, both hemispheres
214.0
2172
Female, age 85, both hemispheres
167.0
2160
Male, age 61, both hemispheres
155.8
2459
Female, age 91, both hemispheres
145.0
Paramedian reticular nucleus nTPM: 317.8
2052
Male, age 76, both hemispheres
466.2
2057
Male, age 80, both hemispheres
294.7
2313
Male, age 61, both hemispheres
264.9
2050
Female, age 85, both hemispheres
245.3
Pedunculopontine tegmental nucleus nTPM: 318.0
2334
Male, age 80, both hemispheres
356.8
2338
Male, age 61, both hemispheres
324.2
1921
Female, age 85, both hemispheres
273.0
Pontine nuclei nTPM: 199.3
2109
Female, age 72, unknown
269.3
1863
Male, age 55, unknown
249.0
2115
Male, age 80, left hemisphere
230.3
1968
Male, age 76, left hemisphere
215.3
2787
Female, age 85, both hemispheres
188.2
2319
Female, age 91, both hemispheres
162.7
2454
Male, age 74, left hemisphere
145.9
2727
Male, age 61, right hemisphere
133.8
Pontine raphe nucleus nTPM: 241.4
2853
Male, age 76, midline
272.2
2122
Female, age 85, midline
210.5
Posteroventral cochlear nucleus nTPM: 284.0
2070
Male, age 76, both hemispheres
339.9
2371
Male, age 61, both hemispheres
309.6
2341
Male, age 80, both hemispheres
294.7
2752
Female, age 85, both hemispheres
242.5
2135
Female, age 91, both hemispheres
233.2
Principal sensory trigeminal nucleus nTPM: 214.9
2324
Male, age 76, both hemispheres
368.2
2158
Male, age 61, both hemispheres
176.1
2008
Male, age 80, left hemisphere
168.4
2367
Female, age 91, left hemisphere
146.8
Reticular pontine nucleus, caudal nTPM: 215.8
2092
Male, age 76, both hemispheres
344.1
2559
Male, age 74, both hemispheres
213.8
2457
Female, age 91, both hemispheres
160.4
2332
Male, age 80, right hemisphere
144.8
Reticular pontine nucleus, oral nTPM: 215.9
1939
Male, age 80, both hemispheres
284.6
2167
Male, age 76, both hemispheres
254.2
2012
Female, age 85, both hemispheres
213.8
2366
Female, age 91, both hemispheres
166.1
2361
Male, age 74, both hemispheres
160.6
Reticulotegmental nucleus nTPM: 254.4
2325
Male, age 76, both hemispheres
263.0
2322
Female, age 91, both hemispheres
258.4
2333
Male, age 80, both hemispheres
253.9
2452
Male, age 74, both hemispheres
242.4
Spinal trigeminal nucleus, oral nTPM: 271.4
1978
Male, age 76, both hemispheres
294.8
2737
Female, age 85, both hemispheres
284.1
2164
Male, age 80, both hemispheres
235.2
Subcoeruleus area nTPM: 258.1
2451
Male, age 74, both hemispheres
295.2
2323
Female, age 91, left hemisphere
272.1
1958
Male, age 80, both hemispheres
261.6
2369
Female, age 85, left hemisphere
233.5
2089
Male, age 76, left hemisphere
227.9
Superior olive nTPM: 223.2
2364
Male, age 74, right hemisphere
270.3
2020
Male, age 76, both hemispheres
268.0
1875
Female, age 85, both hemispheres
206.4
2329
Male, age 80, right hemisphere
201.3
2561
Female, age 91, both hemispheres
170.0
Ventral periolivary nuclei nTPM: 218.4
2023
Male, age 76, both hemispheres
298.5
2130
Female, age 85, both hemispheres
216.2
2165
Male, age 80, both hemispheres
207.1
2794
Female, age 91, left hemisphere
151.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 242.3
1959
Male, age 76, both hemispheres
294.4
2359
Male, age 61, both hemispheres
277.8
2840
Female, age 85, both hemispheres
255.1
2161
Male, age 80, both hemispheres
229.4
2449
Male, age 74, both hemispheres
202.3
2456
Female, age 91, both hemispheres
194.7
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
68.1
Pig sample
Sample description
nTPM
Pons nTPM: 68.1
Samples: 4
Max nTPM: 79.9
Min nTPM: 58.2
Sample A
Female
79.9
Sample B
Female
58.2
Sample C
Male
61.6
Sample D
Male
72.8
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
