HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:99.6 nTPM
HPA Brain:176.4 nTPM
GTEx:99.6 nTPM
FANTOM5:148.1 Scaled Tags Per Million
Pig:188.9 nTPM
Mouse:141.3 nTPM
Allen mouse:5.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006741
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 176.4
Sample id Sample description nTPM
Hippocampus
nTPM: 176.4
2148 Female, age 91, left hemisphere 208.9
1898 Male, age 80, left hemisphere 189.1
1911 Female, age 85, right hemisphere 179.6
1855 Male, age 76, left hemisphere 172.9
2529 Female, age 94, left hemisphere 162.3
2621 Female, age 67, right hemisphere 145.5
Dentate gyrus
nTPM: 159.6
2528 Male, age 74, both hemispheres 202.2
2530 Female, age 94, left hemisphere 168.5
2246 Female, age 85, both hemispheres 167.5
2010 Male, age 76, both hemispheres 144.1
2531 Female, age 67, both hemispheres 139.1
1927 Female, age 91, both hemispheres 136.4
Entorhinal gyrus
nTPM: 143.1
2117 Female, age 91, right hemisphere 208.1
2686 Male, age 75, right hemisphere 157.9
1938 Female, age 85, left hemisphere 135.6
1787 Male, age 76, left hemisphere 128.2
2764 Male, age 80, right hemisphere 125.1
2613 Female, age 94, left hemisphere 103.9
Hippocampus, CA1
nTPM: 158.3
1873 Female, age 85, both hemispheres 198.7
2527 Male, age 74, both hemispheres 164.4
2082 Female, age 91, right hemisphere 151.3
2045 Male, age 76, both hemispheres 139.2
2749 Male, age 80, left hemisphere 137.8
Hippocampus, CA2
nTPM: 161.4
1963 Male, age 80, left hemisphere 205.6
2249 Male, age 74, both hemispheres 174.1
1940 Female, age 85, left hemisphere 174.0
2437 Female, age 94, left hemisphere 173.5
2113 Female, age 91, right hemisphere 144.7
1892 Male, age 76, both hemispheres 96.3
Hippocampus, CA3
nTPM: 141.2
2436 Male, age 74, both hemispheres 179.1
1891 Female, age 85, both hemispheres 171.9
2861 Female, age 67, both hemispheres 167.0
2620 Female, age 94, left hemisphere 129.8
1867 Male, age 76, both hemispheres 107.1
2137 Male, age 80, left hemisphere 92.2
Parahippocampal cortex
nTPM: 118.3
2250 Female, age 67, right hemisphere 162.4
2692 Male, age 74, both hemispheres 136.7
1933 Female, age 85, both hemispheres 136.0
2622 Female, age 67, right hemisphere 127.8
2018 Male, age 76, both hemispheres 110.7
2245 Female, age 91, both hemispheres 106.1
2532 Female, age 72, left hemisphere 105.8
2693 Female, age 94, both hemispheres 102.5
1850 Male, age 80, both hemispheres 100.2
1990 Female, age 91, right hemisphere 94.9
Perirhinal gyrus
nTPM: 97.9
1847 Female, age 91, left hemisphere 101.1
2521 Female, age 94, right hemisphere 100.3
1841 Female, age 85, right hemisphere 97.3
2848 Male, age 76, right hemisphere 95.9
1794 Male, age 80, right hemisphere 95.0
Subiculum
nTPM: 143.9
2729 Female, age 91, right hemisphere 240.8
2619 Male, age 74, both hemispheres 137.6
2042 Male, age 76, both hemispheres 131.2
1977 Female, age 85, both hemispheres 127.8
1901 Male, age 80, both hemispheres 114.3
2438 Female, age 94, left hemisphere 111.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 99.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 99.6
Samples: 197

Max nTPM: 190.0
Min nTPM: 26.2
Std nTPM: 34.5
Median nTPM: 92.8
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 190.0
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 184.2
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 181.6
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 175.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 174.9
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 172.2
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 171.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 171.7
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 169.9
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 168.3
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 168.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 148.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 148.1
FF:10153-102I9 76 years, female 183.1
FF:10169-103B7 60 years, female 113.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 188.9
Pig sample Sample description nTPM
Subiculum
nTPM: 188.9
Samples: 4

Max nTPM: 203.9
Min nTPM: 158.4
Sample A Female 203.9
Sample B Female 202.4
Sample C Male 190.9
Sample D Male 158.4
Dorsal hippocampus
nTPM: 135.2
Samples: 4

Max nTPM: 142.5
Min nTPM: 119.7
Sample A Female 142.5
Sample B Female 139.4
Sample C Male 139.2
Sample D Male 119.7
Entorhinal cortex
nTPM: 169.0
Samples: 4

Max nTPM: 187.8
Min nTPM: 149.4
Sample A Female 160.7
Sample B Female 178.1
Sample C Male 187.8
Sample D Male 149.4
Ventral hippocampus
nTPM: 177.3
Samples: 4

Max nTPM: 243.2
Min nTPM: 139.8
Sample A Female 154.9
Sample B Female 171.1
Sample C Male 243.2
Sample D Male 139.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 141.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 139.1
Samples: 4

Max nTPM: 150.6
Min nTPM: 122.6
Sample A Male 134.8
Sample B Male 122.6
Sample C Female 148.2
Sample D Female 150.6
Hippocampal formation
nTPM: 141.3
Samples: 4

Max nTPM: 157.8
Min nTPM: 125.2
Sample A Male 157.8
Sample B Male 134.5
Sample C Female 125.2
Sample D Female 147.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.0
69015290 Antisense, RP_050310_02_F08, Mouse strain C57BL/6J (56 days, male) 5.0

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