HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:28.1 nTPM
HPA Brain:3.5 nTPM
GTEx:28.1 nTPM
FANTOM5:32.1 Scaled Tags Per Million
Pig:94.6 nTPM
Mouse:29.5 nTPM
Allen mouse:10.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA017639
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 3.5
Sample id Sample description nTPM
Hippocampus
nTPM: 3.2
1898 Male, age 80, left hemisphere 4.3
2529 Female, age 94, left hemisphere 3.3
1911 Female, age 85, right hemisphere 3.0
2148 Female, age 91, left hemisphere 3.0
2621 Female, age 67, right hemisphere 3.0
1855 Male, age 76, left hemisphere 2.8
Dentate gyrus
nTPM: 3.1
1927 Female, age 91, both hemispheres 3.6
2010 Male, age 76, both hemispheres 3.3
2528 Male, age 74, both hemispheres 3.2
2246 Female, age 85, both hemispheres 3.0
2530 Female, age 94, left hemisphere 2.7
2531 Female, age 67, both hemispheres 2.7
Entorhinal gyrus
nTPM: 2.8
1938 Female, age 85, left hemisphere 3.2
1787 Male, age 76, left hemisphere 3.1
2613 Female, age 94, left hemisphere 2.8
2117 Female, age 91, right hemisphere 2.7
2686 Male, age 75, right hemisphere 2.6
2764 Male, age 80, right hemisphere 2.6
Hippocampus, CA1
nTPM: 3.5
2749 Male, age 80, left hemisphere 4.9
2527 Male, age 74, both hemispheres 3.5
2045 Male, age 76, both hemispheres 3.4
1873 Female, age 85, both hemispheres 2.9
2082 Female, age 91, right hemisphere 2.9
Hippocampus, CA2
nTPM: 3.1
1892 Male, age 76, both hemispheres 4.2
2249 Male, age 74, both hemispheres 3.4
1940 Female, age 85, left hemisphere 3.0
1963 Male, age 80, left hemisphere 2.7
2113 Female, age 91, right hemisphere 2.7
2437 Female, age 94, left hemisphere 2.4
Hippocampus, CA3
nTPM: 3.2
1867 Male, age 76, both hemispheres 4.0
2436 Male, age 74, both hemispheres 3.8
2861 Female, age 67, both hemispheres 3.2
2137 Male, age 80, left hemisphere 2.9
2620 Female, age 94, left hemisphere 2.7
1891 Female, age 85, both hemispheres 2.6
Parahippocampal cortex
nTPM: 3.2
1933 Female, age 85, both hemispheres 4.0
2245 Female, age 91, both hemispheres 3.5
2250 Female, age 67, right hemisphere 3.3
2693 Female, age 94, both hemispheres 3.3
1850 Male, age 80, both hemispheres 3.2
1990 Female, age 91, right hemisphere 3.2
2692 Male, age 74, both hemispheres 3.2
2622 Female, age 67, right hemisphere 2.9
2018 Male, age 76, both hemispheres 2.6
2532 Female, age 72, left hemisphere 2.4
Perirhinal gyrus
nTPM: 3.5
1794 Male, age 80, right hemisphere 4.0
1847 Female, age 91, left hemisphere 3.6
1841 Female, age 85, right hemisphere 3.4
2848 Male, age 76, right hemisphere 3.4
2521 Female, age 94, right hemisphere 2.9
Subiculum
nTPM: 3.2
2438 Female, age 94, left hemisphere 4.0
1901 Male, age 80, both hemispheres 3.2
2042 Male, age 76, both hemispheres 3.2
1977 Female, age 85, both hemispheres 3.1
2619 Male, age 74, both hemispheres 3.1
2729 Female, age 91, right hemisphere 2.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.1
Samples: 197

Max nTPM: 44.1
Min nTPM: 18.3
Std nTPM: 4.9
Median nTPM: 27.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 44.1
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 40.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 40.5
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 40.4
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 39.4
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 38.9
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 38.6
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 38.6
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 38.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 37.9
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 37.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.1
FF:10153-102I9 76 years, female 35.1
FF:10169-103B7 60 years, female 29.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 94.6
Pig sample Sample description nTPM
Subiculum
nTPM: 86.9
Samples: 4

Max nTPM: 116.7
Min nTPM: 74.8
Sample A Female 116.7
Sample B Female 81.1
Sample C Male 74.9
Sample D Male 74.8
Dorsal hippocampus
nTPM: 94.7
Samples: 4

Max nTPM: 119.6
Min nTPM: 69.8
Sample A Female 119.6
Sample B Female 96.0
Sample C Male 93.2
Sample D Male 69.8
Entorhinal cortex
nTPM: 87.3
Samples: 4

Max nTPM: 108.7
Min nTPM: 67.6
Sample A Female 80.6
Sample B Female 108.7
Sample C Male 92.4
Sample D Male 67.6
Ventral hippocampus
nTPM: 84.7
Samples: 4

Max nTPM: 98.5
Min nTPM: 75.3
Sample A Female 98.5
Sample B Female 75.3
Sample C Male 81.4
Sample D Male 83.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 29.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.5
Samples: 4

Max nTPM: 31.8
Min nTPM: 27.1
Sample A Male 29.0
Sample B Male 31.8
Sample C Female 30.1
Sample D Female 27.1
Hippocampal formation
nTPM: 28.2
Samples: 4

Max nTPM: 30.4
Min nTPM: 25.3
Sample A Male 30.4
Sample B Male 27.0
Sample C Female 25.3
Sample D Female 30.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.2
71789921 Antisense, RP_050926_02_C10, Mouse strain C57BL/6J (56 days, male) 10.2

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