HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:350.1 nTPM
HPA Brain:175.0 nTPM
GTEx:350.1 nTPM
FANTOM5:9.4 Scaled Tags Per Million
Pig:211.4 nTPM
Mouse:228.2 nTPM
Allen mouse:20.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001609Antibody HPA001666Antibody CAB010894
Glial cells HighLowHigh
Neuronal cells HighHighHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 175.0
Sample id Sample description nTPM
Hippocampus
nTPM: 174.5
1855 Male, age 76, left hemisphere 186.1
1898 Male, age 80, left hemisphere 181.4
2529 Female, age 94, left hemisphere 178.1
1911 Female, age 85, right hemisphere 171.4
2621 Female, age 67, right hemisphere 169.9
2148 Female, age 91, left hemisphere 159.7
Dentate gyrus
nTPM: 175.0
2530 Female, age 94, left hemisphere 238.9
2010 Male, age 76, both hemispheres 178.3
1927 Female, age 91, both hemispheres 167.8
2246 Female, age 85, both hemispheres 161.0
2531 Female, age 67, both hemispheres 159.7
2528 Male, age 74, both hemispheres 144.5
Entorhinal gyrus
nTPM: 161.3
2686 Male, age 75, right hemisphere 192.1
2117 Female, age 91, right hemisphere 171.7
1787 Male, age 76, left hemisphere 163.5
1938 Female, age 85, left hemisphere 157.3
2764 Male, age 80, right hemisphere 147.1
2613 Female, age 94, left hemisphere 136.2
Hippocampus, CA1
nTPM: 164.9
1873 Female, age 85, both hemispheres 190.8
2749 Male, age 80, left hemisphere 167.4
2045 Male, age 76, both hemispheres 159.0
2527 Male, age 74, both hemispheres 156.6
2082 Female, age 91, right hemisphere 150.9
Hippocampus, CA2
nTPM: 170.4
1963 Male, age 80, left hemisphere 189.4
1892 Male, age 76, both hemispheres 186.9
2437 Female, age 94, left hemisphere 173.7
1940 Female, age 85, left hemisphere 164.8
2113 Female, age 91, right hemisphere 160.8
2249 Male, age 74, both hemispheres 146.6
Hippocampus, CA3
nTPM: 154.0
1891 Female, age 85, both hemispheres 188.7
2137 Male, age 80, left hemisphere 177.0
1867 Male, age 76, both hemispheres 171.8
2861 Female, age 67, both hemispheres 136.2
2436 Male, age 74, both hemispheres 135.2
2620 Female, age 94, left hemisphere 115.3
Parahippocampal cortex
nTPM: 163.4
1850 Male, age 80, both hemispheres 192.1
2245 Female, age 91, both hemispheres 179.9
2018 Male, age 76, both hemispheres 173.6
2532 Female, age 72, left hemisphere 172.1
1990 Female, age 91, right hemisphere 167.7
2692 Male, age 74, both hemispheres 165.9
1933 Female, age 85, both hemispheres 152.3
2693 Female, age 94, both hemispheres 149.0
2250 Female, age 67, right hemisphere 147.5
2622 Female, age 67, right hemisphere 134.1
Perirhinal gyrus
nTPM: 159.1
1847 Female, age 91, left hemisphere 172.4
1841 Female, age 85, right hemisphere 170.2
2848 Male, age 76, right hemisphere 169.0
1794 Male, age 80, right hemisphere 160.1
2521 Female, age 94, right hemisphere 123.8
Subiculum
nTPM: 173.4
2042 Male, age 76, both hemispheres 187.9
1901 Male, age 80, both hemispheres 187.8
2438 Female, age 94, left hemisphere 178.0
1977 Female, age 85, both hemispheres 176.5
2729 Female, age 91, right hemisphere 165.9
2619 Male, age 74, both hemispheres 144.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 350.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 350.1
Samples: 197

Max nTPM: 845.3
Min nTPM: 182.3
Std nTPM: 97.3
Median nTPM: 324.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 845.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 675.0
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 669.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 631.0
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 630.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 621.0
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 598.9
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 569.9
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 565.5
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 544.0
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 530.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 9.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 9.4
FF:10169-103B7 60 years, female 10.3
FF:10153-102I9 76 years, female 8.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 211.4
Pig sample Sample description nTPM
Subiculum
nTPM: 200.5
Samples: 4

Max nTPM: 257.1
Min nTPM: 167.0
Sample A Female 257.1
Sample B Female 193.9
Sample C Male 183.8
Sample D Male 167.0
Dorsal hippocampus
nTPM: 211.4
Samples: 4

Max nTPM: 238.2
Min nTPM: 184.1
Sample A Female 238.2
Sample B Female 197.0
Sample C Male 226.1
Sample D Male 184.1
Entorhinal cortex
nTPM: 192.7
Samples: 4

Max nTPM: 214.6
Min nTPM: 184.0
Sample A Female 184.9
Sample B Female 214.6
Sample C Male 187.1
Sample D Male 184.0
Ventral hippocampus
nTPM: 197.1
Samples: 4

Max nTPM: 222.2
Min nTPM: 179.9
Sample A Female 185.7
Sample B Female 179.9
Sample C Male 222.2
Sample D Male 200.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 228.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 218.3
Samples: 4

Max nTPM: 244.3
Min nTPM: 194.7
Sample A Male 209.4
Sample B Male 194.7
Sample C Female 224.8
Sample D Female 244.3
Hippocampal formation
nTPM: 228.2
Samples: 4

Max nTPM: 242.6
Min nTPM: 215.2
Sample A Male 226.9
Sample B Male 228.0
Sample C Female 242.6
Sample D Female 215.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 20.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 20.8
71232800 Antisense, RP_050503_02_A03, Mouse strain C57BL/6J (56 days, male) 20.8

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