HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:45.5 nTPM
HPA Brain:72.2 nTPM
GTEx:45.5 nTPM
FANTOM5:51.0 Scaled Tags Per Million
Pig:44.6 nTPM
Mouse:94.2 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA013694Antibody CAB011518
Glial cells MediumMedium
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 72.2
Sample id Sample description nTPM
Hippocampus
nTPM: 71.4
1898 Male, age 80, left hemisphere 76.5
2621 Female, age 67, right hemisphere 75.6
2529 Female, age 94, left hemisphere 74.9
2148 Female, age 91, left hemisphere 74.3
1911 Female, age 85, right hemisphere 64.7
1855 Male, age 76, left hemisphere 62.4
Dentate gyrus
nTPM: 64.6
2530 Female, age 94, left hemisphere 68.0
2531 Female, age 67, both hemispheres 67.2
2528 Male, age 74, both hemispheres 65.5
1927 Female, age 91, both hemispheres 63.6
2246 Female, age 85, both hemispheres 61.9
2010 Male, age 76, both hemispheres 61.3
Entorhinal gyrus
nTPM: 72.2
2117 Female, age 91, right hemisphere 79.6
1938 Female, age 85, left hemisphere 73.0
2686 Male, age 75, right hemisphere 72.5
1787 Male, age 76, left hemisphere 71.1
2764 Male, age 80, right hemisphere 69.3
2613 Female, age 94, left hemisphere 67.7
Hippocampus, CA1
nTPM: 64.4
2527 Male, age 74, both hemispheres 68.4
1873 Female, age 85, both hemispheres 66.6
2045 Male, age 76, both hemispheres 64.5
2082 Female, age 91, right hemisphere 62.8
2749 Male, age 80, left hemisphere 59.9
Hippocampus, CA2
nTPM: 65.1
1892 Male, age 76, both hemispheres 69.7
2249 Male, age 74, both hemispheres 67.3
2113 Female, age 91, right hemisphere 65.7
1940 Female, age 85, left hemisphere 64.0
1963 Male, age 80, left hemisphere 62.1
2437 Female, age 94, left hemisphere 61.5
Hippocampus, CA3
nTPM: 67.9
2436 Male, age 74, both hemispheres 77.9
2861 Female, age 67, both hemispheres 71.0
1867 Male, age 76, both hemispheres 70.6
2620 Female, age 94, left hemisphere 68.8
1891 Female, age 85, both hemispheres 61.8
2137 Male, age 80, left hemisphere 57.1
Parahippocampal cortex
nTPM: 66.1
1850 Male, age 80, both hemispheres 72.3
1933 Female, age 85, both hemispheres 71.6
2245 Female, age 91, both hemispheres 71.5
2250 Female, age 67, right hemisphere 70.2
1990 Female, age 91, right hemisphere 67.2
2622 Female, age 67, right hemisphere 63.7
2692 Male, age 74, both hemispheres 63.5
2532 Female, age 72, left hemisphere 61.8
2018 Male, age 76, both hemispheres 60.8
2693 Female, age 94, both hemispheres 58.7
Perirhinal gyrus
nTPM: 71.6
1847 Female, age 91, left hemisphere 76.9
2848 Male, age 76, right hemisphere 74.6
1794 Male, age 80, right hemisphere 72.7
1841 Female, age 85, right hemisphere 72.1
2521 Female, age 94, right hemisphere 61.5
Subiculum
nTPM: 65.9
2619 Male, age 74, both hemispheres 72.6
1977 Female, age 85, both hemispheres 69.1
2729 Female, age 91, right hemisphere 67.3
2042 Male, age 76, both hemispheres 65.4
1901 Male, age 80, both hemispheres 61.7
2438 Female, age 94, left hemisphere 59.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 45.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 45.5
Samples: 197

Max nTPM: 77.1
Min nTPM: 25.6
Std nTPM: 7.8
Median nTPM: 44.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 77.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 65.7
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 64.6
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 63.9
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 63.5
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 62.4
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 60.8
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 60.5
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 59.5
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 59.2
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 59.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 51.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 51.0
FF:10153-102I9 76 years, female 67.7
FF:10169-103B7 60 years, female 34.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 44.6
Pig sample Sample description nTPM
Subiculum
nTPM: 44.6
Samples: 4

Max nTPM: 53.5
Min nTPM: 38.0
Sample A Female 53.5
Sample B Female 42.5
Sample C Male 44.3
Sample D Male 38.0
Dorsal hippocampus
nTPM: 39.5
Samples: 4

Max nTPM: 43.4
Min nTPM: 30.9
Sample A Female 43.4
Sample B Female 40.3
Sample C Male 43.2
Sample D Male 30.9
Entorhinal cortex
nTPM: 40.3
Samples: 4

Max nTPM: 43.3
Min nTPM: 33.7
Sample A Female 43.3
Sample B Female 41.1
Sample C Male 43.0
Sample D Male 33.7
Ventral hippocampus
nTPM: 39.7
Samples: 4

Max nTPM: 52.0
Min nTPM: 33.2
Sample A Female 34.5
Sample B Female 33.2
Sample C Male 52.0
Sample D Male 39.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 94.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 94.2
Samples: 4

Max nTPM: 102.6
Min nTPM: 89.7
Sample A Male 89.7
Sample B Male 92.1
Sample C Female 92.5
Sample D Female 102.6
Hippocampal formation
nTPM: 85.9
Samples: 4

Max nTPM: 93.3
Min nTPM: 80.0
Sample A Male 80.0
Sample B Male 82.1
Sample C Female 88.0
Sample D Female 93.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
876 Antisense, RP_Baylor_103363, Mouse strain C57BL/6J (56 days, male) 0.4
877 Antisense, RP_Baylor_103363, Mouse strain C57BL/6J (56 days, male) 0.4

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