HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:23.7 nTPM
HPA Brain:34.1 nTPM
GTEx:23.7 nTPM
FANTOM5:87.5 Scaled Tags Per Million
Pig:30.9 nTPM
Mouse:19.8 nTPM
Allen mouse:4.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026948Antibody CAB003674
Glial cells LowLow
Neuronal cells MediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.1
Sample id Sample description nTPM
Hippocampus
nTPM: 25.6
1911 Female, age 85, right hemisphere 30.7
1855 Male, age 76, left hemisphere 27.8
1898 Male, age 80, left hemisphere 25.5
2148 Female, age 91, left hemisphere 23.7
2621 Female, age 67, right hemisphere 23.0
2529 Female, age 94, left hemisphere 22.9
Dentate gyrus
nTPM: 27.0
1927 Female, age 91, both hemispheres 31.2
2531 Female, age 67, both hemispheres 30.6
2246 Female, age 85, both hemispheres 29.1
2528 Male, age 74, both hemispheres 26.7
2010 Male, age 76, both hemispheres 22.8
2530 Female, age 94, left hemisphere 21.3
Entorhinal gyrus
nTPM: 30.1
1938 Female, age 85, left hemisphere 41.8
2613 Female, age 94, left hemisphere 33.0
1787 Male, age 76, left hemisphere 30.2
2686 Male, age 75, right hemisphere 27.5
2764 Male, age 80, right hemisphere 25.9
2117 Female, age 91, right hemisphere 22.2
Hippocampus, CA1
nTPM: 26.7
2082 Female, age 91, right hemisphere 28.7
1873 Female, age 85, both hemispheres 28.2
2527 Male, age 74, both hemispheres 26.8
2749 Male, age 80, left hemisphere 26.1
2045 Male, age 76, both hemispheres 23.8
Hippocampus, CA2
nTPM: 25.1
1892 Male, age 76, both hemispheres 29.4
1940 Female, age 85, left hemisphere 27.6
2113 Female, age 91, right hemisphere 27.6
2249 Male, age 74, both hemispheres 22.8
1963 Male, age 80, left hemisphere 21.7
2437 Female, age 94, left hemisphere 21.4
Hippocampus, CA3
nTPM: 27.8
2620 Female, age 94, left hemisphere 31.7
1891 Female, age 85, both hemispheres 29.2
1867 Male, age 76, both hemispheres 28.0
2137 Male, age 80, left hemisphere 27.2
2436 Male, age 74, both hemispheres 26.1
2861 Female, age 67, both hemispheres 24.4
Parahippocampal cortex
nTPM: 34.1
2693 Female, age 94, both hemispheres 38.5
1850 Male, age 80, both hemispheres 37.8
1933 Female, age 85, both hemispheres 37.3
2532 Female, age 72, left hemisphere 36.3
2245 Female, age 91, both hemispheres 35.1
2622 Female, age 67, right hemisphere 32.8
2250 Female, age 67, right hemisphere 31.5
2018 Male, age 76, both hemispheres 31.3
2692 Male, age 74, both hemispheres 30.6
1990 Female, age 91, right hemisphere 29.5
Perirhinal gyrus
nTPM: 33.6
1841 Female, age 85, right hemisphere 37.6
1847 Female, age 91, left hemisphere 36.5
2848 Male, age 76, right hemisphere 33.2
2521 Female, age 94, right hemisphere 33.0
1794 Male, age 80, right hemisphere 27.7
Subiculum
nTPM: 28.0
2438 Female, age 94, left hemisphere 42.6
1977 Female, age 85, both hemispheres 30.2
2619 Male, age 74, both hemispheres 25.2
2729 Female, age 91, right hemisphere 25.2
1901 Male, age 80, both hemispheres 23.1
2042 Male, age 76, both hemispheres 21.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.7
Samples: 197

Max nTPM: 48.0
Min nTPM: 12.4
Std nTPM: 6.3
Median nTPM: 23.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 48.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 43.6
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 43.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 41.0
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 40.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 39.7
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 37.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 37.3
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 37.0
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 37.0
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 34.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 87.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 87.5
FF:10169-103B7 60 years, female 92.4
FF:10153-102I9 76 years, female 82.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 30.9
Pig sample Sample description nTPM
Subiculum
nTPM: 26.5
Samples: 4

Max nTPM: 32.8
Min nTPM: 22.5
Sample A Female 32.8
Sample B Female 25.7
Sample C Male 25.1
Sample D Male 22.5
Dorsal hippocampus
nTPM: 30.9
Samples: 4

Max nTPM: 43.0
Min nTPM: 23.6
Sample A Female 43.0
Sample B Female 28.6
Sample C Male 28.5
Sample D Male 23.6
Entorhinal cortex
nTPM: 27.1
Samples: 4

Max nTPM: 29.3
Min nTPM: 22.8
Sample A Female 27.3
Sample B Female 29.3
Sample C Male 29.0
Sample D Male 22.8
Ventral hippocampus
nTPM: 27.7
Samples: 4

Max nTPM: 32.8
Min nTPM: 23.6
Sample A Female 32.8
Sample B Female 23.6
Sample C Male 26.2
Sample D Male 28.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.3
Samples: 4

Max nTPM: 21.2
Min nTPM: 17.8
Sample A Male 19.4
Sample B Male 17.8
Sample C Female 21.2
Sample D Female 18.9
Hippocampal formation
nTPM: 19.8
Samples: 4

Max nTPM: 24.6
Min nTPM: 16.8
Sample A Male 24.6
Sample B Male 18.1
Sample C Female 19.8
Sample D Female 16.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.6
68269052 Antisense, RP_041208_01_G03, Mouse strain C57BL/6J (56 days, male) 4.6

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