HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:73.4 nTPM
HPA Brain:30.2 nTPM
GTEx:73.4 nTPM
FANTOM5:243.9 Scaled Tags Per Million
Pig:41.8 nTPM
Mouse:298.9 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA005640
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.2
Sample id Sample description nTPM
Hippocampus
nTPM: 22.4
1898 Male, age 80, left hemisphere 33.0
2621 Female, age 67, right hemisphere 25.0
2148 Female, age 91, left hemisphere 21.1
1855 Male, age 76, left hemisphere 20.3
2529 Female, age 94, left hemisphere 19.2
1911 Female, age 85, right hemisphere 16.1
Dentate gyrus
nTPM: 22.7
2010 Male, age 76, both hemispheres 30.7
1927 Female, age 91, both hemispheres 23.6
2530 Female, age 94, left hemisphere 23.4
2528 Male, age 74, both hemispheres 21.1
2246 Female, age 85, both hemispheres 19.1
2531 Female, age 67, both hemispheres 18.2
Entorhinal gyrus
nTPM: 25.6
1938 Female, age 85, left hemisphere 30.1
2764 Male, age 80, right hemisphere 30.0
2613 Female, age 94, left hemisphere 28.1
2686 Male, age 75, right hemisphere 23.6
1787 Male, age 76, left hemisphere 22.0
2117 Female, age 91, right hemisphere 19.9
Hippocampus, CA1
nTPM: 25.3
2749 Male, age 80, left hemisphere 36.2
2045 Male, age 76, both hemispheres 26.3
1873 Female, age 85, both hemispheres 24.6
2527 Male, age 74, both hemispheres 20.7
2082 Female, age 91, right hemisphere 18.8
Hippocampus, CA2
nTPM: 25.4
1892 Male, age 76, both hemispheres 41.9
1963 Male, age 80, left hemisphere 25.3
2249 Male, age 74, both hemispheres 24.2
2437 Female, age 94, left hemisphere 22.5
2113 Female, age 91, right hemisphere 19.4
1940 Female, age 85, left hemisphere 19.2
Hippocampus, CA3
nTPM: 26.3
1867 Male, age 76, both hemispheres 36.8
2137 Male, age 80, left hemisphere 29.4
2436 Male, age 74, both hemispheres 27.3
1891 Female, age 85, both hemispheres 23.6
2620 Female, age 94, left hemisphere 21.5
2861 Female, age 67, both hemispheres 19.1
Parahippocampal cortex
nTPM: 27.4
1850 Male, age 80, both hemispheres 32.7
2693 Female, age 94, both hemispheres 30.3
2250 Female, age 67, right hemisphere 27.8
2532 Female, age 72, left hemisphere 27.5
1933 Female, age 85, both hemispheres 26.9
1990 Female, age 91, right hemisphere 26.9
2245 Female, age 91, both hemispheres 26.5
2692 Male, age 74, both hemispheres 25.5
2018 Male, age 76, both hemispheres 25.2
2622 Female, age 67, right hemisphere 25.2
Perirhinal gyrus
nTPM: 30.2
1847 Female, age 91, left hemisphere 39.2
1841 Female, age 85, right hemisphere 30.5
1794 Male, age 80, right hemisphere 29.2
2521 Female, age 94, right hemisphere 27.6
2848 Male, age 76, right hemisphere 24.7
Subiculum
nTPM: 23.3
1977 Female, age 85, both hemispheres 27.6
1901 Male, age 80, both hemispheres 26.9
2438 Female, age 94, left hemisphere 23.9
2042 Male, age 76, both hemispheres 21.8
2619 Male, age 74, both hemispheres 21.0
2729 Female, age 91, right hemisphere 18.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 73.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 73.4
Samples: 197

Max nTPM: 265.6
Min nTPM: 37.4
Std nTPM: 24.3
Median nTPM: 70.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 265.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 172.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 132.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 130.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 127.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 125.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 116.3
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 114.9
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 114.5
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 114.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 110.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 243.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 243.9
FF:10169-103B7 60 years, female 355.1
FF:10153-102I9 76 years, female 132.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 41.8
Pig sample Sample description nTPM
Subiculum
nTPM: 39.0
Samples: 4

Max nTPM: 51.7
Min nTPM: 34.2
Sample A Female 51.7
Sample B Female 35.0
Sample C Male 34.2
Sample D Male 34.9
Dorsal hippocampus
nTPM: 41.8
Samples: 4

Max nTPM: 51.9
Min nTPM: 31.8
Sample A Female 51.9
Sample B Female 36.2
Sample C Male 47.2
Sample D Male 31.8
Entorhinal cortex
nTPM: 41.8
Samples: 4

Max nTPM: 52.9
Min nTPM: 36.2
Sample A Female 40.4
Sample B Female 52.9
Sample C Male 37.7
Sample D Male 36.2
Ventral hippocampus
nTPM: 40.4
Samples: 4

Max nTPM: 48.1
Min nTPM: 30.3
Sample A Female 48.1
Sample B Female 30.3
Sample C Male 45.9
Sample D Male 37.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 298.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 298.9
Samples: 4

Max nTPM: 319.7
Min nTPM: 283.5
Sample A Male 283.5
Sample B Male 299.2
Sample C Female 319.7
Sample D Female 293.3
Hippocampal formation
nTPM: 286.5
Samples: 4

Max nTPM: 339.2
Min nTPM: 261.2
Sample A Male 339.2
Sample B Male 279.8
Sample C Female 261.2
Sample D Female 265.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
71763831 Antisense, RP_050921_02_F12, Mouse strain C57BL/6J (56 days, male) 0.6

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