HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:216.6 nTPM
HPA Brain:225.5 nTPM
GTEx:216.6 nTPM
FANTOM5:267.4 Scaled Tags Per Million
Pig:200.4 nTPM
Mouse:53.5 nTPM
Allen mouse:5.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038295Antibody HPA038296
Glial cells MediumLow
Neuronal cells LowNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 225.5
Sample id Sample description nTPM
Hippocampus
nTPM: 157.4
2529 Female, age 94, left hemisphere 206.9
1911 Female, age 85, right hemisphere 198.2
2621 Female, age 67, right hemisphere 170.8
1898 Male, age 80, left hemisphere 142.2
2148 Female, age 91, left hemisphere 119.6
1855 Male, age 76, left hemisphere 106.6
Dentate gyrus
nTPM: 155.9
2530 Female, age 94, left hemisphere 333.7
2010 Male, age 76, both hemispheres 135.1
2531 Female, age 67, both hemispheres 134.1
2246 Female, age 85, both hemispheres 133.7
2528 Male, age 74, both hemispheres 114.8
1927 Female, age 91, both hemispheres 83.8
Entorhinal gyrus
nTPM: 163.4
2117 Female, age 91, right hemisphere 277.9
2686 Male, age 75, right hemisphere 187.0
2764 Male, age 80, right hemisphere 172.7
1938 Female, age 85, left hemisphere 144.9
2613 Female, age 94, left hemisphere 124.4
1787 Male, age 76, left hemisphere 73.3
Hippocampus, CA1
nTPM: 108.2
2527 Male, age 74, both hemispheres 166.6
1873 Female, age 85, both hemispheres 139.7
2082 Female, age 91, right hemisphere 111.6
2749 Male, age 80, left hemisphere 88.3
2045 Male, age 76, both hemispheres 34.8
Hippocampus, CA2
nTPM: 146.8
1963 Male, age 80, left hemisphere 197.5
2437 Female, age 94, left hemisphere 188.0
2249 Male, age 74, both hemispheres 149.3
1940 Female, age 85, left hemisphere 144.6
2113 Female, age 91, right hemisphere 127.2
1892 Male, age 76, both hemispheres 74.2
Hippocampus, CA3
nTPM: 101.9
1891 Female, age 85, both hemispheres 241.9
1867 Male, age 76, both hemispheres 103.1
2436 Male, age 74, both hemispheres 94.1
2861 Female, age 67, both hemispheres 67.4
2137 Male, age 80, left hemisphere 59.9
2620 Female, age 94, left hemisphere 44.8
Parahippocampal cortex
nTPM: 131.1
2532 Female, age 72, left hemisphere 225.9
2692 Male, age 74, both hemispheres 189.8
2245 Female, age 91, both hemispheres 159.8
1990 Female, age 91, right hemisphere 154.5
1850 Male, age 80, both hemispheres 140.2
1933 Female, age 85, both hemispheres 122.4
2018 Male, age 76, both hemispheres 103.0
2622 Female, age 67, right hemisphere 76.8
2693 Female, age 94, both hemispheres 73.4
2250 Female, age 67, right hemisphere 64.7
Perirhinal gyrus
nTPM: 70.3
2521 Female, age 94, right hemisphere 80.1
1794 Male, age 80, right hemisphere 73.9
1847 Female, age 91, left hemisphere 66.8
1841 Female, age 85, right hemisphere 66.3
2848 Male, age 76, right hemisphere 64.6
Subiculum
nTPM: 225.5
2438 Female, age 94, left hemisphere 295.5
2042 Male, age 76, both hemispheres 292.2
1901 Male, age 80, both hemispheres 288.7
1977 Female, age 85, both hemispheres 212.0
2619 Male, age 74, both hemispheres 148.3
2729 Female, age 91, right hemisphere 116.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 216.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 216.6
Samples: 197

Max nTPM: 770.2
Min nTPM: 17.8
Std nTPM: 134.4
Median nTPM: 186.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 770.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 642.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 631.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 590.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 580.2
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 568.0
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 549.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 534.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 515.2
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 464.6
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 453.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 267.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 267.4
FF:10153-102I9 76 years, female 344.8
FF:10169-103B7 60 years, female 190.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 200.4
Pig sample Sample description nTPM
Subiculum
nTPM: 57.3
Samples: 4

Max nTPM: 69.8
Min nTPM: 36.9
Sample A Female 58.3
Sample B Female 69.8
Sample C Male 36.9
Sample D Male 64.1
Dorsal hippocampus
nTPM: 200.5
Samples: 4

Max nTPM: 320.8
Min nTPM: 45.9
Sample A Female 320.8
Sample B Female 132.5
Sample C Male 302.6
Sample D Male 45.9
Entorhinal cortex
nTPM: 49.2
Samples: 4

Max nTPM: 88.6
Min nTPM: 29.3
Sample A Female 29.6
Sample B Female 88.6
Sample C Male 29.3
Sample D Male 49.4
Ventral hippocampus
nTPM: 100.1
Samples: 4

Max nTPM: 157.6
Min nTPM: 48.4
Sample A Female 136.1
Sample B Female 48.4
Sample C Male 58.4
Sample D Male 157.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 53.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 25.3
Samples: 4

Max nTPM: 36.7
Min nTPM: 11.3
Sample A Male 36.7
Sample B Male 26.9
Sample C Female 26.3
Sample D Female 11.3
Hippocampal formation
nTPM: 53.5
Samples: 4

Max nTPM: 75.9
Min nTPM: 38.6
Sample A Male 38.6
Sample B Male 46.3
Sample C Female 75.9
Sample D Female 53.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.4
69448632 Antisense, RP_050419_02_F04, Mouse strain C57BL/6J (56 days, male) 5.4

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