HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:16.5 nTPM
HPA Brain:27.8 nTPM
GTEx:16.5 nTPM
FANTOM5:49.8 Scaled Tags Per Million
Pig:22.2 nTPM
Mouse:7.2 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.8
Sample id Sample description nTPM
Hippocampus
nTPM: 26.2
2621 Female, age 67, right hemisphere 32.0
1898 Male, age 80, left hemisphere 29.4
2529 Female, age 94, left hemisphere 26.5
1855 Male, age 76, left hemisphere 25.7
2148 Female, age 91, left hemisphere 24.1
1911 Female, age 85, right hemisphere 19.6
Dentate gyrus
nTPM: 25.9
2530 Female, age 94, left hemisphere 39.7
2010 Male, age 76, both hemispheres 26.9
1927 Female, age 91, both hemispheres 22.8
2528 Male, age 74, both hemispheres 22.7
2246 Female, age 85, both hemispheres 21.6
2531 Female, age 67, both hemispheres 21.4
Entorhinal gyrus
nTPM: 26.2
2117 Female, age 91, right hemisphere 28.8
2764 Male, age 80, right hemisphere 28.8
1787 Male, age 76, left hemisphere 28.4
2686 Male, age 75, right hemisphere 24.5
2613 Female, age 94, left hemisphere 23.6
1938 Female, age 85, left hemisphere 22.8
Hippocampus, CA1
nTPM: 25.1
2749 Male, age 80, left hemisphere 34.4
2527 Male, age 74, both hemispheres 28.6
1873 Female, age 85, both hemispheres 23.2
2045 Male, age 76, both hemispheres 19.7
2082 Female, age 91, right hemisphere 19.3
Hippocampus, CA2
nTPM: 27.8
1963 Male, age 80, left hemisphere 34.8
2437 Female, age 94, left hemisphere 32.3
2249 Male, age 74, both hemispheres 27.0
1892 Male, age 76, both hemispheres 25.3
1940 Female, age 85, left hemisphere 24.0
2113 Female, age 91, right hemisphere 23.3
Hippocampus, CA3
nTPM: 24.4
2137 Male, age 80, left hemisphere 27.8
1867 Male, age 76, both hemispheres 25.8
2861 Female, age 67, both hemispheres 24.3
2436 Male, age 74, both hemispheres 23.8
2620 Female, age 94, left hemisphere 22.8
1891 Female, age 85, both hemispheres 21.8
Parahippocampal cortex
nTPM: 24.0
2245 Female, age 91, both hemispheres 28.5
2250 Female, age 67, right hemisphere 28.3
1850 Male, age 80, both hemispheres 26.3
2532 Female, age 72, left hemisphere 24.8
2622 Female, age 67, right hemisphere 23.3
1933 Female, age 85, both hemispheres 23.0
2018 Male, age 76, both hemispheres 22.0
1990 Female, age 91, right hemisphere 21.9
2693 Female, age 94, both hemispheres 21.4
2692 Male, age 74, both hemispheres 20.2
Perirhinal gyrus
nTPM: 26.5
1847 Female, age 91, left hemisphere 29.8
1794 Male, age 80, right hemisphere 29.4
2521 Female, age 94, right hemisphere 25.5
2848 Male, age 76, right hemisphere 25.4
1841 Female, age 85, right hemisphere 22.6
Subiculum
nTPM: 25.3
1977 Female, age 85, both hemispheres 32.1
2619 Male, age 74, both hemispheres 28.7
1901 Male, age 80, both hemispheres 27.4
2729 Female, age 91, right hemisphere 24.0
2042 Male, age 76, both hemispheres 23.5
2438 Female, age 94, left hemisphere 16.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.5
Samples: 197

Max nTPM: 44.8
Min nTPM: 2.1
Std nTPM: 7.1
Median nTPM: 15.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 44.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 44.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 41.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 39.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 35.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 33.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 33.4
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 31.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 30.8
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 30.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 28.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 49.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 49.8
FF:10153-102I9 76 years, female 53.9
FF:10169-103B7 60 years, female 45.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.2
Pig sample Sample description nTPM
Subiculum
nTPM: 18.5
Samples: 4

Max nTPM: 22.5
Min nTPM: 15.7
Sample A Female 22.5
Sample B Female 19.5
Sample C Male 16.3
Sample D Male 15.7
Dorsal hippocampus
nTPM: 22.2
Samples: 4

Max nTPM: 28.0
Min nTPM: 19.1
Sample A Female 28.0
Sample B Female 22.3
Sample C Male 19.2
Sample D Male 19.1
Entorhinal cortex
nTPM: 17.9
Samples: 4

Max nTPM: 21.0
Min nTPM: 15.7
Sample A Female 17.8
Sample B Female 21.0
Sample C Male 16.9
Sample D Male 15.7
Ventral hippocampus
nTPM: 20.4
Samples: 4

Max nTPM: 23.1
Min nTPM: 16.4
Sample A Female 20.2
Sample B Female 16.4
Sample C Male 21.7
Sample D Male 23.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.0
Samples: 4

Max nTPM: 7.4
Min nTPM: 6.6
Sample A Male 7.2
Sample B Male 6.9
Sample C Female 7.4
Sample D Female 6.6
Hippocampal formation
nTPM: 7.2
Samples: 4

Max nTPM: 7.5
Min nTPM: 6.9
Sample A Male 6.9
Sample B Male 7.3
Sample C Female 7.5
Sample D Female 7.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
69608857 Antisense, RP_050426_04_D03, Mouse strain C57BL/6J (56 days, male) 0.8

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