HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:7.4 nTPM
HPA Brain:18.3 nTPM
GTEx:7.4 nTPM
FANTOM5:43.0 Scaled Tags Per Million
Pig:22.3 nTPM
Mouse:24.4 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021571Antibody HPA021647Antibody CAB026473
Glial cells Not detectedMediumNot detected
Neuronal cells Not detectedHighMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 18.3
Sample id Sample description nTPM
Hippocampus
nTPM: 17.9
2529 Female, age 94, left hemisphere 20.6
1911 Female, age 85, right hemisphere 19.5
1898 Male, age 80, left hemisphere 19.0
1855 Male, age 76, left hemisphere 17.4
2621 Female, age 67, right hemisphere 16.3
2148 Female, age 91, left hemisphere 14.4
Dentate gyrus
nTPM: 15.7
2530 Female, age 94, left hemisphere 17.8
1927 Female, age 91, both hemispheres 16.3
2010 Male, age 76, both hemispheres 15.8
2528 Male, age 74, both hemispheres 15.6
2246 Female, age 85, both hemispheres 14.5
2531 Female, age 67, both hemispheres 14.2
Entorhinal gyrus
nTPM: 16.4
2117 Female, age 91, right hemisphere 18.3
2686 Male, age 75, right hemisphere 17.9
1938 Female, age 85, left hemisphere 17.4
2764 Male, age 80, right hemisphere 16.5
1787 Male, age 76, left hemisphere 15.8
2613 Female, age 94, left hemisphere 12.6
Hippocampus, CA1
nTPM: 17.1
2749 Male, age 80, left hemisphere 18.0
2527 Male, age 74, both hemispheres 17.8
2082 Female, age 91, right hemisphere 17.2
2045 Male, age 76, both hemispheres 16.3
1873 Female, age 85, both hemispheres 16.0
Hippocampus, CA2
nTPM: 17.8
2249 Male, age 74, both hemispheres 18.9
1940 Female, age 85, left hemisphere 18.5
2437 Female, age 94, left hemisphere 18.1
1892 Male, age 76, both hemispheres 17.8
1963 Male, age 80, left hemisphere 17.8
2113 Female, age 91, right hemisphere 15.6
Hippocampus, CA3
nTPM: 18.3
2137 Male, age 80, left hemisphere 20.8
2436 Male, age 74, both hemispheres 20.4
1891 Female, age 85, both hemispheres 20.3
1867 Male, age 76, both hemispheres 20.1
2620 Female, age 94, left hemisphere 15.2
2861 Female, age 67, both hemispheres 13.0
Parahippocampal cortex
nTPM: 16.3
2692 Male, age 74, both hemispheres 18.4
1990 Female, age 91, right hemisphere 18.2
2018 Male, age 76, both hemispheres 17.1
2245 Female, age 91, both hemispheres 16.8
2693 Female, age 94, both hemispheres 16.3
1850 Male, age 80, both hemispheres 16.2
2250 Female, age 67, right hemisphere 16.2
2532 Female, age 72, left hemisphere 15.6
1933 Female, age 85, both hemispheres 14.3
2622 Female, age 67, right hemisphere 14.0
Perirhinal gyrus
nTPM: 14.7
1841 Female, age 85, right hemisphere 16.1
2521 Female, age 94, right hemisphere 15.2
2848 Male, age 76, right hemisphere 14.6
1794 Male, age 80, right hemisphere 13.8
1847 Female, age 91, left hemisphere 13.7
Subiculum
nTPM: 17.3
1901 Male, age 80, both hemispheres 20.9
1977 Female, age 85, both hemispheres 17.4
2619 Male, age 74, both hemispheres 17.2
2042 Male, age 76, both hemispheres 17.1
2729 Female, age 91, right hemisphere 17.0
2438 Female, age 94, left hemisphere 14.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 7.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 7.4
Samples: 197

Max nTPM: 14.3
Min nTPM: 3.8
Std nTPM: 1.8
Median nTPM: 7.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 14.3
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 13.0
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 12.5
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 12.3
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 12.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 12.0
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 11.5
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 11.4
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 11.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 11.2
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 10.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 43.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 43.0
FF:10169-103B7 60 years, female 46.7
FF:10153-102I9 76 years, female 39.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.3
Pig sample Sample description nTPM
Subiculum
nTPM: 19.2
Samples: 4

Max nTPM: 22.3
Min nTPM: 17.2
Sample A Female 22.3
Sample B Female 19.0
Sample C Male 18.4
Sample D Male 17.2
Dorsal hippocampus
nTPM: 22.3
Samples: 4

Max nTPM: 26.3
Min nTPM: 17.0
Sample A Female 26.3
Sample B Female 20.3
Sample C Male 25.4
Sample D Male 17.0
Entorhinal cortex
nTPM: 16.6
Samples: 4

Max nTPM: 18.5
Min nTPM: 14.2
Sample A Female 16.6
Sample B Female 18.5
Sample C Male 17.2
Sample D Male 14.2
Ventral hippocampus
nTPM: 20.3
Samples: 4

Max nTPM: 22.4
Min nTPM: 17.0
Sample A Female 19.9
Sample B Female 17.0
Sample C Male 22.4
Sample D Male 21.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.8
Samples: 4

Max nTPM: 26.3
Min nTPM: 22.3
Sample A Male 22.3
Sample B Male 22.6
Sample C Female 23.9
Sample D Female 26.3
Hippocampal formation
nTPM: 24.4
Samples: 4

Max nTPM: 25.7
Min nTPM: 22.5
Sample A Male 25.7
Sample B Male 22.5
Sample C Female 25.1
Sample D Female 24.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
324213 Antisense, RP_040617_01_E08, Mouse strain C57BL/6J (56 days, male) 0.8
76081926 Antisense, RP_060626_01_A06, Mouse strain C57BL/6J (56 days, male) 0.5

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