HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:10.8 nTPM
HPA Brain:34.8 nTPM
GTEx:10.8 nTPM
FANTOM5:15.6 Scaled Tags Per Million
Pig:56.9 nTPM
Mouse:19.2 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA015853
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.8
Sample id Sample description nTPM
Hippocampus
nTPM: 31.0
1855 Male, age 76, left hemisphere 33.7
1898 Male, age 80, left hemisphere 33.2
2148 Female, age 91, left hemisphere 31.1
2621 Female, age 67, right hemisphere 30.4
2529 Female, age 94, left hemisphere 29.1
1911 Female, age 85, right hemisphere 28.6
Dentate gyrus
nTPM: 29.1
2246 Female, age 85, both hemispheres 33.1
1927 Female, age 91, both hemispheres 30.7
2010 Male, age 76, both hemispheres 30.3
2530 Female, age 94, left hemisphere 27.7
2531 Female, age 67, both hemispheres 26.7
2528 Male, age 74, both hemispheres 26.1
Entorhinal gyrus
nTPM: 31.2
1938 Female, age 85, left hemisphere 33.8
2764 Male, age 80, right hemisphere 32.1
1787 Male, age 76, left hemisphere 31.7
2613 Female, age 94, left hemisphere 31.5
2117 Female, age 91, right hemisphere 30.3
2686 Male, age 75, right hemisphere 27.7
Hippocampus, CA1
nTPM: 30.5
1873 Female, age 85, both hemispheres 32.4
2045 Male, age 76, both hemispheres 32.1
2749 Male, age 80, left hemisphere 32.0
2527 Male, age 74, both hemispheres 29.3
2082 Female, age 91, right hemisphere 26.8
Hippocampus, CA2
nTPM: 29.2
1892 Male, age 76, both hemispheres 36.1
1940 Female, age 85, left hemisphere 29.2
2437 Female, age 94, left hemisphere 28.4
1963 Male, age 80, left hemisphere 28.1
2113 Female, age 91, right hemisphere 27.5
2249 Male, age 74, both hemispheres 26.1
Hippocampus, CA3
nTPM: 29.8
1891 Female, age 85, both hemispheres 32.7
2137 Male, age 80, left hemisphere 31.6
1867 Male, age 76, both hemispheres 30.3
2620 Female, age 94, left hemisphere 29.7
2861 Female, age 67, both hemispheres 27.9
2436 Male, age 74, both hemispheres 26.5
Parahippocampal cortex
nTPM: 32.2
1850 Male, age 80, both hemispheres 38.8
2245 Female, age 91, both hemispheres 35.1
1933 Female, age 85, both hemispheres 32.8
2532 Female, age 72, left hemisphere 32.6
1990 Female, age 91, right hemisphere 32.5
2250 Female, age 67, right hemisphere 32.3
2693 Female, age 94, both hemispheres 31.6
2692 Male, age 74, both hemispheres 29.1
2622 Female, age 67, right hemisphere 28.7
2018 Male, age 76, both hemispheres 28.2
Perirhinal gyrus
nTPM: 34.8
1841 Female, age 85, right hemisphere 37.0
1847 Female, age 91, left hemisphere 35.8
1794 Male, age 80, right hemisphere 34.8
2848 Male, age 76, right hemisphere 34.8
2521 Female, age 94, right hemisphere 31.6
Subiculum
nTPM: 29.5
1977 Female, age 85, both hemispheres 32.2
2438 Female, age 94, left hemisphere 32.0
2619 Male, age 74, both hemispheres 30.3
1901 Male, age 80, both hemispheres 29.7
2042 Male, age 76, both hemispheres 27.2
2729 Female, age 91, right hemisphere 25.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.8
Samples: 197

Max nTPM: 18.0
Min nTPM: 6.9
Std nTPM: 2.2
Median nTPM: 10.5
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 18.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 17.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 17.2
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 17.2
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 17.1
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 17.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 16.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 16.2
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 16.1
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 15.9
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 14.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 15.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 15.6
FF:10153-102I9 76 years, female 15.7
FF:10169-103B7 60 years, female 15.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 56.9
Pig sample Sample description nTPM
Subiculum
nTPM: 54.9
Samples: 4

Max nTPM: 65.5
Min nTPM: 50.0
Sample A Female 65.5
Sample B Female 50.0
Sample C Male 50.6
Sample D Male 53.5
Dorsal hippocampus
nTPM: 47.5
Samples: 4

Max nTPM: 54.3
Min nTPM: 39.8
Sample A Female 51.8
Sample B Female 43.9
Sample C Male 54.3
Sample D Male 39.8
Entorhinal cortex
nTPM: 57.0
Samples: 4

Max nTPM: 59.5
Min nTPM: 51.0
Sample A Female 59.5
Sample B Female 51.0
Sample C Male 58.4
Sample D Male 58.9
Ventral hippocampus
nTPM: 45.0
Samples: 4

Max nTPM: 50.3
Min nTPM: 41.4
Sample A Female 46.6
Sample B Female 41.4
Sample C Male 50.3
Sample D Male 41.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.2
Samples: 4

Max nTPM: 20.5
Min nTPM: 16.6
Sample A Male 19.4
Sample B Male 20.2
Sample C Female 16.6
Sample D Female 20.5
Hippocampal formation
nTPM: 16.2
Samples: 4

Max nTPM: 17.3
Min nTPM: 14.9
Sample A Male 16.1
Sample B Male 17.3
Sample C Female 16.5
Sample D Female 14.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
68844743 Antisense, RP_050222_02_C11, Mouse strain C57BL/6J (56 days, male) 0.4

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