HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:21.5 nTPM
HPA Brain:51.7 nTPM
GTEx:21.5 nTPM
FANTOM5:63.5 Scaled Tags Per Million
Pig:37.1 nTPM
Mouse:73.6 nTPM
Allen mouse:5.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029249Antibody HPA029251
Glial cells Not detectedNot detected
Neuronal cells LowLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 51.7
Sample id Sample description nTPM
Hippocampus
nTPM: 40.8
1898 Male, age 80, left hemisphere 55.2
1855 Male, age 76, left hemisphere 44.6
2621 Female, age 67, right hemisphere 42.9
2148 Female, age 91, left hemisphere 37.3
1911 Female, age 85, right hemisphere 32.5
2529 Female, age 94, left hemisphere 32.5
Dentate gyrus
nTPM: 44.7
2530 Female, age 94, left hemisphere 60.7
2010 Male, age 76, both hemispheres 51.8
1927 Female, age 91, both hemispheres 47.3
2528 Male, age 74, both hemispheres 36.9
2246 Female, age 85, both hemispheres 35.8
2531 Female, age 67, both hemispheres 35.8
Entorhinal gyrus
nTPM: 38.7
2613 Female, age 94, left hemisphere 47.8
2764 Male, age 80, right hemisphere 39.8
1787 Male, age 76, left hemisphere 38.1
2686 Male, age 75, right hemisphere 37.6
1938 Female, age 85, left hemisphere 35.6
2117 Female, age 91, right hemisphere 33.4
Hippocampus, CA1
nTPM: 51.7
2749 Male, age 80, left hemisphere 103.7
1873 Female, age 85, both hemispheres 51.3
2527 Male, age 74, both hemispheres 36.4
2045 Male, age 76, both hemispheres 35.6
2082 Female, age 91, right hemisphere 31.5
Hippocampus, CA2
nTPM: 47.8
1963 Male, age 80, left hemisphere 83.3
1892 Male, age 76, both hemispheres 66.6
2437 Female, age 94, left hemisphere 43.3
2249 Male, age 74, both hemispheres 32.8
1940 Female, age 85, left hemisphere 31.6
2113 Female, age 91, right hemisphere 29.0
Hippocampus, CA3
nTPM: 43.1
2137 Male, age 80, left hemisphere 61.7
1867 Male, age 76, both hemispheres 47.1
2620 Female, age 94, left hemisphere 45.8
2861 Female, age 67, both hemispheres 39.8
2436 Male, age 74, both hemispheres 33.6
1891 Female, age 85, both hemispheres 30.7
Parahippocampal cortex
nTPM: 37.4
2018 Male, age 76, both hemispheres 43.1
2622 Female, age 67, right hemisphere 39.2
1850 Male, age 80, both hemispheres 38.1
2693 Female, age 94, both hemispheres 38.0
2245 Female, age 91, both hemispheres 36.9
1933 Female, age 85, both hemispheres 36.6
2532 Female, age 72, left hemisphere 36.1
2692 Male, age 74, both hemispheres 35.4
1990 Female, age 91, right hemisphere 35.3
2250 Female, age 67, right hemisphere 35.3
Perirhinal gyrus
nTPM: 42.6
1794 Male, age 80, right hemisphere 48.1
1847 Female, age 91, left hemisphere 46.5
2521 Female, age 94, right hemisphere 45.8
1841 Female, age 85, right hemisphere 40.7
2848 Male, age 76, right hemisphere 31.9
Subiculum
nTPM: 37.5
1901 Male, age 80, both hemispheres 45.6
2438 Female, age 94, left hemisphere 42.2
1977 Female, age 85, both hemispheres 40.3
2619 Male, age 74, both hemispheres 36.4
2042 Male, age 76, both hemispheres 31.7
2729 Female, age 91, right hemisphere 28.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.5
Samples: 197

Max nTPM: 69.5
Min nTPM: 7.7
Std nTPM: 8.6
Median nTPM: 19.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 69.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 51.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 49.7
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 48.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 44.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 43.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 39.0
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 38.7
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 37.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 37.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 37.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 63.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 63.5
FF:10153-102I9 76 years, female 71.9
FF:10169-103B7 60 years, female 55.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 37.1
Pig sample Sample description nTPM
Subiculum
nTPM: 28.3
Samples: 4

Max nTPM: 34.4
Min nTPM: 24.5
Sample A Female 34.4
Sample B Female 24.5
Sample C Male 27.3
Sample D Male 27.1
Dorsal hippocampus
nTPM: 37.2
Samples: 4

Max nTPM: 45.8
Min nTPM: 31.6
Sample A Female 45.8
Sample B Female 39.4
Sample C Male 31.8
Sample D Male 31.6
Entorhinal cortex
nTPM: 34.4
Samples: 4

Max nTPM: 38.2
Min nTPM: 32.3
Sample A Female 38.2
Sample B Female 33.7
Sample C Male 33.3
Sample D Male 32.3
Ventral hippocampus
nTPM: 33.1
Samples: 4

Max nTPM: 40.1
Min nTPM: 21.5
Sample A Female 34.1
Sample B Female 21.5
Sample C Male 40.1
Sample D Male 36.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 73.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 69.5
Samples: 4

Max nTPM: 75.1
Min nTPM: 62.8
Sample A Male 71.9
Sample B Male 68.0
Sample C Female 62.8
Sample D Female 75.1
Hippocampal formation
nTPM: 73.6
Samples: 4

Max nTPM: 80.1
Min nTPM: 61.5
Sample A Male 61.5
Sample B Male 80.1
Sample C Female 76.2
Sample D Female 76.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.9
69014422 Antisense, RP_050310_01_A10, Mouse strain C57BL/6J (56 days, male) 5.9

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