HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:26.1 nTPM
HPA Brain:32.8 nTPM
GTEx:26.1 nTPM
FANTOM5:44.4 Scaled Tags Per Million
Pig:12.1 nTPM
Mouse:10.3 nTPM
Allen mouse:3.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030164Antibody HPA030165Antibody HPA030166
Glial cells Not detectedNot detectedNot detected
Neuronal cells LowNot detectedHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.8
Sample id Sample description nTPM
Hippocampus
nTPM: 24.7
2529 Female, age 94, left hemisphere 29.9
1911 Female, age 85, right hemisphere 27.4
2621 Female, age 67, right hemisphere 24.0
2148 Female, age 91, left hemisphere 23.9
1855 Male, age 76, left hemisphere 23.5
1898 Male, age 80, left hemisphere 19.8
Dentate gyrus
nTPM: 25.3
2530 Female, age 94, left hemisphere 30.6
2010 Male, age 76, both hemispheres 28.1
2246 Female, age 85, both hemispheres 26.5
2531 Female, age 67, both hemispheres 25.5
2528 Male, age 74, both hemispheres 22.7
1927 Female, age 91, both hemispheres 18.5
Entorhinal gyrus
nTPM: 27.3
2117 Female, age 91, right hemisphere 36.3
2764 Male, age 80, right hemisphere 33.1
2686 Male, age 75, right hemisphere 26.6
2613 Female, age 94, left hemisphere 25.6
1787 Male, age 76, left hemisphere 22.2
1938 Female, age 85, left hemisphere 19.9
Hippocampus, CA1
nTPM: 23.0
2082 Female, age 91, right hemisphere 28.7
1873 Female, age 85, both hemispheres 26.6
2527 Male, age 74, both hemispheres 22.5
2045 Male, age 76, both hemispheres 20.8
2749 Male, age 80, left hemisphere 16.2
Hippocampus, CA2
nTPM: 24.9
1963 Male, age 80, left hemisphere 28.0
2113 Female, age 91, right hemisphere 27.9
2437 Female, age 94, left hemisphere 27.9
1940 Female, age 85, left hemisphere 26.4
2249 Male, age 74, both hemispheres 23.4
1892 Male, age 76, both hemispheres 15.9
Hippocampus, CA3
nTPM: 23.8
1891 Female, age 85, both hemispheres 33.3
2620 Female, age 94, left hemisphere 25.0
1867 Male, age 76, both hemispheres 24.3
2861 Female, age 67, both hemispheres 20.9
2436 Male, age 74, both hemispheres 20.6
2137 Male, age 80, left hemisphere 18.5
Parahippocampal cortex
nTPM: 24.4
2692 Male, age 74, both hemispheres 31.0
2532 Female, age 72, left hemisphere 29.6
1990 Female, age 91, right hemisphere 27.9
2245 Female, age 91, both hemispheres 26.8
2018 Male, age 76, both hemispheres 25.7
1850 Male, age 80, both hemispheres 22.6
2693 Female, age 94, both hemispheres 22.1
2622 Female, age 67, right hemisphere 20.8
1933 Female, age 85, both hemispheres 19.8
2250 Female, age 67, right hemisphere 17.7
Perirhinal gyrus
nTPM: 18.7
2848 Male, age 76, right hemisphere 22.2
2521 Female, age 94, right hemisphere 18.6
1794 Male, age 80, right hemisphere 18.2
1847 Female, age 91, left hemisphere 17.3
1841 Female, age 85, right hemisphere 17.1
Subiculum
nTPM: 32.8
2042 Male, age 76, both hemispheres 43.0
1901 Male, age 80, both hemispheres 37.8
2438 Female, age 94, left hemisphere 33.4
2619 Male, age 74, both hemispheres 28.5
1977 Female, age 85, both hemispheres 27.1
2729 Female, age 91, right hemisphere 27.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 26.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.1
Samples: 197

Max nTPM: 88.4
Min nTPM: 6.0
Std nTPM: 13.6
Median nTPM: 22.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 88.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 73.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 73.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 72.6
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 65.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 59.8
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 59.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 58.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 58.0
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 57.4
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 52.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 44.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 44.4
FF:10153-102I9 76 years, female 62.9
FF:10169-103B7 60 years, female 25.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.1
Pig sample Sample description nTPM
Subiculum
nTPM: 8.5
Samples: 4

Max nTPM: 9.4
Min nTPM: 7.6
Sample A Female 9.4
Sample B Female 8.8
Sample C Male 7.6
Sample D Male 8.3
Dorsal hippocampus
nTPM: 12.1
Samples: 4

Max nTPM: 15.9
Min nTPM: 7.7
Sample A Female 15.9
Sample B Female 10.7
Sample C Male 14.2
Sample D Male 7.7
Entorhinal cortex
nTPM: 7.6
Samples: 4

Max nTPM: 9.3
Min nTPM: 6.6
Sample A Female 6.6
Sample B Female 7.8
Sample C Male 6.7
Sample D Male 9.3
Ventral hippocampus
nTPM: 11.2
Samples: 4

Max nTPM: 12.6
Min nTPM: 7.7
Sample A Female 12.3
Sample B Female 7.7
Sample C Male 12.3
Sample D Male 12.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 10.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.5
Samples: 4

Max nTPM: 12.1
Min nTPM: 5.6
Sample A Male 8.7
Sample B Male 7.5
Sample C Female 12.1
Sample D Female 5.6
Hippocampal formation
nTPM: 10.3
Samples: 4

Max nTPM: 12.6
Min nTPM: 8.1
Sample A Male 12.6
Sample B Male 8.1
Sample C Female 8.6
Sample D Female 11.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.4
77800915 Antisense, RP_070219_01_A03, Mouse strain C57BL/6J (56 days, male) 3.4

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